Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hmgn1P18608 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn1P18608 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn1P18608 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn1P18608 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn1P18608 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn1P18608 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn1P18608 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Hmgn1P18608 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn1P18608 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn1P18608 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.36■□□□□ 0.69
Hmgn1P18608 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn1P18608 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn1P18608 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn1P18608 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Hmgn1P18608 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.35■□□□□ 0.69
Hmgn1P18608 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn1P18608 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn1P18608 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.34■□□□□ 0.69
Hmgn1P18608 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.34■□□□□ 0.69
Hmgn1P18608 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn1P18608 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.34■□□□□ 0.69
Hmgn1P18608 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn1P18608 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn1P18608 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Hmgn1P18608 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmgn1P18608 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmgn1P18608 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmgn1P18608 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn1P18608 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn1P18608 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn1P18608 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.33■□□□□ 0.68
Hmgn1P18608 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn1P18608 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn1P18608 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn1P18608 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.32■□□□□ 0.68
Hmgn1P18608 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.32■□□□□ 0.68
Hmgn1P18608 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.32■□□□□ 0.68
Hmgn1P18608 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn1P18608 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hmgn1P18608 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn1P18608 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn1P18608 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hmgn1P18608 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn1P18608 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Hmgn1P18608 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn1P18608 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn1P18608 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn1P18608 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Hmgn1P18608 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.31■□□□□ 0.68
Hmgn1P18608 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn1P18608 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn1P18608 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn1P18608 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn1P18608 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hmgn1P18608 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn1P18608 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.31■□□□□ 0.68
Hmgn1P18608 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.3■□□□□ 0.68
Hmgn1P18608 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgn1P18608 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Hmgn1P18608 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgn1P18608 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgn1P18608 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgn1P18608 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgn1P18608 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn1P18608 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hmgn1P18608 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.29■□□□□ 0.68
Hmgn1P18608 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.29■□□□□ 0.68
Hmgn1P18608 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn1P18608 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn1P18608 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn1P18608 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn1P18608 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn1P18608 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hmgn1P18608 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn1P18608 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Hmgn1P18608 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn1P18608 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn1P18608 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn1P18608 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn1P18608 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn1P18608 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.27■□□□□ 0.68
Hmgn1P18608 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn1P18608 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn1P18608 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hmgn1P18608 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmgn1P18608 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Hmgn1P18608 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hmgn1P18608 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hmgn1P18608 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn1P18608 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn1P18608 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn1P18608 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn1P18608 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn1P18608 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hmgn1P18608 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.26■□□□□ 0.67
Hmgn1P18608 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hmgn1P18608 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn1P18608 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn1P18608 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms