Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.86■□□□□ 0.29
Cdx1P18111 Gm5786-201ENSMUST00000085368 882 ntBASIC16.86■□□□□ 0.29
Cdx1P18111 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx1P18111 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx1P18111 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.86■□□□□ 0.29
Cdx1P18111 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx1P18111 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdx1P18111 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cdx1P18111 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx1P18111 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdx1P18111 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdx1P18111 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx1P18111 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx1P18111 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Cdx1P18111 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx1P18111 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx1P18111 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cdx1P18111 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.84■□□□□ 0.29
Cdx1P18111 Gm45364-201ENSMUST00000210883 159 ntBASIC16.84■□□□□ 0.29
Cdx1P18111 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdx1P18111 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx1P18111 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdx1P18111 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdx1P18111 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx1P18111 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.83■□□□□ 0.28
Cdx1P18111 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx1P18111 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx1P18111 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx1P18111 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx1P18111 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdx1P18111 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx1P18111 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.82■□□□□ 0.28
Cdx1P18111 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx1P18111 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx1P18111 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdx1P18111 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx1P18111 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx1P18111 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.81■□□□□ 0.28
Cdx1P18111 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdx1P18111 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx1P18111 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx1P18111 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.81■□□□□ 0.28
Cdx1P18111 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
Cdx1P18111 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx1P18111 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx1P18111 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx1P18111 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx1P18111 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx1P18111 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cdx1P18111 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx1P18111 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx1P18111 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx1P18111 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx1P18111 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.8■□□□□ 0.28
Cdx1P18111 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx1P18111 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cdx1P18111 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx1P18111 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx1P18111 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdx1P18111 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx1P18111 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx1P18111 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx1P18111 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx1P18111 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.79■□□□□ 0.28
Cdx1P18111 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdx1P18111 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx1P18111 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx1P18111 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx1P18111 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx1P18111 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Cdx1P18111 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cdx1P18111 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdx1P18111 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx1P18111 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx1P18111 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx1P18111 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx1P18111 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx1P18111 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx1P18111 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdx1P18111 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx1P18111 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx1P18111 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx1P18111 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx1P18111 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdx1P18111 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdx1P18111 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdx1P18111 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdx1P18111 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdx1P18111 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdx1P18111 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms