Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Srp54P14576 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Srp54P14576 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54P14576 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54P14576 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54P14576 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54P14576 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54P14576 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54P14576 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54P14576 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Srp54P14576 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.75■□□□□ 0.91
Srp54P14576 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54P14576 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54P14576 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.75■□□□□ 0.91
Srp54P14576 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Srp54P14576 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54P14576 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54P14576 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Srp54P14576 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54P14576 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54P14576 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Srp54P14576 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Srp54P14576 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Srp54P14576 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Srp54P14576 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Srp54P14576 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54P14576 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54P14576 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54P14576 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54P14576 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Srp54P14576 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54P14576 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54P14576 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54P14576 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54P14576 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54P14576 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54P14576 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54P14576 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Srp54P14576 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54P14576 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54P14576 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Srp54P14576 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54P14576 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Srp54P14576 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54P14576 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54P14576 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.7■□□□□ 0.9
Srp54P14576 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.7■□□□□ 0.9
Srp54P14576 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54P14576 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.7■□□□□ 0.9
Srp54P14576 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Srp54P14576 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.7■□□□□ 0.9
Srp54P14576 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54P14576 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54P14576 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54P14576 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54P14576 Gm22238-201ENSMUST00000175222 88 ntBASIC20.69■□□□□ 0.9
Srp54P14576 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.69■□□□□ 0.9
Srp54P14576 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54P14576 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54P14576 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54P14576 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54P14576 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54P14576 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54P14576 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54P14576 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srp54P14576 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srp54P14576 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.68■□□□□ 0.9
Srp54P14576 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Srp54P14576 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srp54P14576 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp54P14576 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp54P14576 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Srp54P14576 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp54P14576 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.67■□□□□ 0.9
Srp54P14576 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.67■□□□□ 0.9
Srp54P14576 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp54P14576 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp54P14576 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp54P14576 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54P14576 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54P14576 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54P14576 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54P14576 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.66■□□□□ 0.9
Srp54P14576 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54P14576 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54P14576 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Srp54P14576 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.65■□□□□ 0.9
Srp54P14576 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Srp54P14576 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.65■□□□□ 0.9
Srp54P14576 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Srp54P14576 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Srp54P14576 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Srp54P14576 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Srp54P14576 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Srp54P14576 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Srp54P14576 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Srp54P14576 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.64■□□□□ 0.89
Srp54P14576 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Srp54P14576 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Srp54P14576 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms