Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh3P10287 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cdh3P10287 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh3P10287 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh3P10287 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh3P10287 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh3P10287 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh3P10287 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh3P10287 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh3P10287 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh3P10287 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.37■□□□□ 0.69
Cdh3P10287 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh3P10287 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh3P10287 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh3P10287 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh3P10287 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh3P10287 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh3P10287 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdh3P10287 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh3P10287 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh3P10287 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Cdh3P10287 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh3P10287 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh3P10287 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh3P10287 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh3P10287 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh3P10287 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh3P10287 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.35■□□□□ 0.69
Cdh3P10287 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh3P10287 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh3P10287 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh3P10287 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh3P10287 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh3P10287 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh3P10287 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh3P10287 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cdh3P10287 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh3P10287 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh3P10287 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh3P10287 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh3P10287 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh3P10287 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh3P10287 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh3P10287 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.32■□□□□ 0.68
Cdh3P10287 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh3P10287 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.32■□□□□ 0.68
Cdh3P10287 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.32■□□□□ 0.68
Cdh3P10287 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh3P10287 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh3P10287 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh3P10287 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cdh3P10287 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh3P10287 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh3P10287 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh3P10287 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh3P10287 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cdh3P10287 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh3P10287 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh3P10287 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh3P10287 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cdh3P10287 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Cdh3P10287 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cdh3P10287 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh3P10287 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh3P10287 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh3P10287 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh3P10287 Gm10420-201ENSMUST00000121713 882 ntBASIC19.29■□□□□ 0.68
Cdh3P10287 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.29■□□□□ 0.68
Cdh3P10287 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh3P10287 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdh3P10287 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh3P10287 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh3P10287 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cdh3P10287 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh3P10287 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh3P10287 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdh3P10287 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh3P10287 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh3P10287 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh3P10287 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh3P10287 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh3P10287 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.27■□□□□ 0.68
Cdh3P10287 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh3P10287 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh3P10287 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh3P10287 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.27■□□□□ 0.67
Cdh3P10287 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh3P10287 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.27■□□□□ 0.67
Cdh3P10287 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Cdh3P10287 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cdh3P10287 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh3P10287 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.26■□□□□ 0.67
Cdh3P10287 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh3P10287 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh3P10287 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cdh3P10287 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh3P10287 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh3P10287 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh3P10287 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Cdh3P10287 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms