Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxa6P09092 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxa6P09092 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxa6P09092 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa6P09092 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hoxa6P09092 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.18■□□□□ 0.5
Hoxa6P09092 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa6P09092 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa6P09092 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa6P09092 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hoxa6P09092 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa6P09092 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Hoxa6P09092 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa6P09092 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa6P09092 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.17■□□□□ 0.5
Hoxa6P09092 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa6P09092 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa6P09092 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa6P09092 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa6P09092 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.17■□□□□ 0.5
Hoxa6P09092 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxa6P09092 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxa6P09092 Gm15039-201ENSMUST00000118914 875 ntBASIC18.16■□□□□ 0.5
Hoxa6P09092 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxa6P09092 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxa6P09092 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hoxa6P09092 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxa6P09092 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxa6P09092 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hoxa6P09092 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.15■□□□□ 0.5
Hoxa6P09092 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hoxa6P09092 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hoxa6P09092 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Hoxa6P09092 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hoxa6P09092 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxa6P09092 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxa6P09092 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxa6P09092 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.14■□□□□ 0.49
Hoxa6P09092 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.14■□□□□ 0.49
Hoxa6P09092 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hoxa6P09092 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxa6P09092 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Hoxa6P09092 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxa6P09092 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa6P09092 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa6P09092 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.13■□□□□ 0.49
Hoxa6P09092 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa6P09092 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa6P09092 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa6P09092 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa6P09092 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hoxa6P09092 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxa6P09092 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Hoxa6P09092 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa6P09092 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.12■□□□□ 0.49
Hoxa6P09092 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa6P09092 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
Hoxa6P09092 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.12■□□□□ 0.49
Hoxa6P09092 Gm12922-201ENSMUST00000120626 809 ntBASIC18.12■□□□□ 0.49
Hoxa6P09092 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.12■□□□□ 0.49
Hoxa6P09092 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa6P09092 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa6P09092 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxa6P09092 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hoxa6P09092 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hoxa6P09092 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa6P09092 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa6P09092 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.11■□□□□ 0.49
Hoxa6P09092 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa6P09092 Gm13241-201ENSMUST00000094493 780 ntBASIC18.11■□□□□ 0.49
Hoxa6P09092 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa6P09092 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa6P09092 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxa6P09092 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa6P09092 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa6P09092 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.1■□□□□ 0.49
Hoxa6P09092 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa6P09092 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa6P09092 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa6P09092 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa6P09092 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxa6P09092 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Hoxa6P09092 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxa6P09092 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hoxa6P09092 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxa6P09092 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxa6P09092 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.09■□□□□ 0.49
Hoxa6P09092 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Hoxa6P09092 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxa6P09092 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxa6P09092 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxa6P09092 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxa6P09092 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxa6P09092 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.08■□□□□ 0.48
Hoxa6P09092 Gm9847-201ENSMUST00000052528 599 ntBASIC18.08■□□□□ 0.48
Hoxa6P09092 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxa6P09092 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxa6P09092 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxa6P09092 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxa6P09092 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms