Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ApoeP08226 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ApoeP08226 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ApoeP08226 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ApoeP08226 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ApoeP08226 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ApoeP08226 Gm44428-201ENSMUST00000204474 874 ntBASIC19.98■□□□□ 0.79
ApoeP08226 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ApoeP08226 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ApoeP08226 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ApoeP08226 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
ApoeP08226 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ApoeP08226 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ApoeP08226 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Gm7432-201ENSMUST00000210343 879 ntBASIC19.96■□□□□ 0.79
ApoeP08226 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ApoeP08226 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ApoeP08226 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ApoeP08226 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ApoeP08226 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
ApoeP08226 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ApoeP08226 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ApoeP08226 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ApoeP08226 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ApoeP08226 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ApoeP08226 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ApoeP08226 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ApoeP08226 Gm11599-201ENSMUST00000118720 878 ntBASIC19.94■□□□□ 0.78
ApoeP08226 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ApoeP08226 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.94■□□□□ 0.78
ApoeP08226 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ApoeP08226 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ApoeP08226 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ApoeP08226 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
ApoeP08226 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ApoeP08226 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ApoeP08226 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.93■□□□□ 0.78
ApoeP08226 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.93■□□□□ 0.78
ApoeP08226 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ApoeP08226 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ApoeP08226 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ApoeP08226 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ApoeP08226 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ApoeP08226 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
ApoeP08226 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ApoeP08226 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ApoeP08226 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.92■□□□□ 0.78
ApoeP08226 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ApoeP08226 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ApoeP08226 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ApoeP08226 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ApoeP08226 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.91■□□□□ 0.78
ApoeP08226 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ApoeP08226 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ApoeP08226 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ApoeP08226 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ApoeP08226 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ApoeP08226 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ApoeP08226 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.9■□□□□ 0.78
ApoeP08226 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ApoeP08226 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ApoeP08226 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ApoeP08226 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
ApoeP08226 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.89■□□□□ 0.77
ApoeP08226 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ApoeP08226 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ApoeP08226 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ApoeP08226 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ApoeP08226 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ApoeP08226 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ApoeP08226 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ApoeP08226 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ApoeP08226 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms