Protein–RNA interactions for Protein: P04943

Ig kappa chain V-VI region NQ6-8.3.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04943 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04943 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.13■□□□□ 0.33
P04943 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04943 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04943 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04943 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.13■□□□□ 0.33
P04943 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04943 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04943 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04943 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04943 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04943 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
P04943 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04943 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.12■□□□□ 0.33
P04943 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.12■□□□□ 0.33
P04943 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04943 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.12■□□□□ 0.33
P04943 Gm5921-201ENSMUST00000075898 882 ntBASIC17.12■□□□□ 0.33
P04943 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
P04943 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04943 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04943 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04943 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04943 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04943 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P04943 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04943 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04943 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P04943 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04943 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P04943 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04943 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04943 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.1■□□□□ 0.33
P04943 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.1■□□□□ 0.33
P04943 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04943 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
P04943 Gm43566-201ENSMUST00000196851 808 ntBASIC17.1■□□□□ 0.33
P04943 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04943 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.1■□□□□ 0.33
P04943 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04943 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04943 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P04943 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.09■□□□□ 0.33
P04943 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04943 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.09■□□□□ 0.33
P04943 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04943 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04943 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
P04943 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04943 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04943 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04943 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.09■□□□□ 0.33
P04943 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
P04943 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.08■□□□□ 0.32
P04943 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04943 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04943 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
P04943 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04943 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
P04943 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
P04943 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04943 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04943 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P04943 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04943 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04943 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04943 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P04943 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P04943 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04943 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P04943 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04943 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.06■□□□□ 0.32
P04943 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04943 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P04943 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P04943 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04943 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04943 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.05■□□□□ 0.32
P04943 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.05■□□□□ 0.32
P04943 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04943 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.05■□□□□ 0.32
P04943 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
P04943 Gm13238-201ENSMUST00000117655 780 ntBASIC17.05■□□□□ 0.32
P04943 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04943 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04943 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04943 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04943 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04943 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04943 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.04■□□□□ 0.32
P04943 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04943 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
P04943 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04943 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.03■□□□□ 0.32
P04943 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04943 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.03■□□□□ 0.32
P04943 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04943 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04943 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.02■□□□□ 0.32
P04943 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms