Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa3P02831 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Hoxa3P02831 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa3P02831 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hoxa3P02831 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hoxa3P02831 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa3P02831 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa3P02831 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa3P02831 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa3P02831 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa3P02831 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa3P02831 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.68■□□□□ 0.42
Hoxa3P02831 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa3P02831 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hoxa3P02831 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa3P02831 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa3P02831 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hoxa3P02831 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hoxa3P02831 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa3P02831 Etf1-202ENSMUST00000180351 108 ntBASIC17.67■□□□□ 0.42
Hoxa3P02831 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa3P02831 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa3P02831 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa3P02831 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa3P02831 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Hoxa3P02831 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa3P02831 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa3P02831 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa3P02831 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxa3P02831 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxa3P02831 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.66■□□□□ 0.42
Hoxa3P02831 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.66■□□□□ 0.42
Hoxa3P02831 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hoxa3P02831 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.66■□□□□ 0.42
Hoxa3P02831 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa3P02831 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa3P02831 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa3P02831 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa3P02831 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa3P02831 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.65■□□□□ 0.42
Hoxa3P02831 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa3P02831 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa3P02831 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa3P02831 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.65■□□□□ 0.42
Hoxa3P02831 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.65■□□□□ 0.42
Hoxa3P02831 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa3P02831 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa3P02831 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa3P02831 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxa3P02831 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxa3P02831 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.64■□□□□ 0.41
Hoxa3P02831 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa3P02831 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa3P02831 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.64■□□□□ 0.41
Hoxa3P02831 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.64■□□□□ 0.41
Hoxa3P02831 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.64■□□□□ 0.41
Hoxa3P02831 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa3P02831 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.63■□□□□ 0.41
Hoxa3P02831 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hoxa3P02831 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa3P02831 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hoxa3P02831 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.63■□□□□ 0.41
Hoxa3P02831 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa3P02831 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hoxa3P02831 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa3P02831 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.63■□□□□ 0.41
Hoxa3P02831 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.62■□□□□ 0.41
Hoxa3P02831 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa3P02831 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.61■□□□□ 0.41
Hoxa3P02831 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.61■□□□□ 0.41
Hoxa3P02831 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.61■□□□□ 0.41
Hoxa3P02831 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa3P02831 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa3P02831 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa3P02831 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.6■□□□□ 0.41
Hoxa3P02831 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.6■□□□□ 0.41
Hoxa3P02831 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.6■□□□□ 0.41
Hoxa3P02831 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Hoxa3P02831 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa3P02831 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.6■□□□□ 0.41
Hoxa3P02831 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa3P02831 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa3P02831 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa3P02831 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa3P02831 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa3P02831 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa3P02831 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.59■□□□□ 0.41
Hoxa3P02831 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa3P02831 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms