Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac3O88895 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Hdac3O88895 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac3O88895 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac3O88895 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac3O88895 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac3O88895 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac3O88895 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
Hdac3O88895 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac3O88895 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac3O88895 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac3O88895 Gm10420-201ENSMUST00000121713 882 ntBASIC18.79■□□□□ 0.6
Hdac3O88895 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hdac3O88895 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hdac3O88895 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac3O88895 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac3O88895 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac3O88895 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac3O88895 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac3O88895 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac3O88895 Cap2-205ENSMUST00000225824 1634 ntBASIC18.78■□□□□ 0.6
Hdac3O88895 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac3O88895 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac3O88895 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.78■□□□□ 0.6
Hdac3O88895 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Hdac3O88895 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.78■□□□□ 0.6
Hdac3O88895 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac3O88895 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac3O88895 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac3O88895 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac3O88895 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hdac3O88895 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac3O88895 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac3O88895 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac3O88895 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac3O88895 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac3O88895 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac3O88895 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.77■□□□□ 0.59
Hdac3O88895 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
Hdac3O88895 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hdac3O88895 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac3O88895 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac3O88895 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.76■□□□□ 0.59
Hdac3O88895 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac3O88895 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.76■□□□□ 0.59
Hdac3O88895 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hdac3O88895 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac3O88895 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.75■□□□□ 0.59
Hdac3O88895 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.75■□□□□ 0.59
Hdac3O88895 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac3O88895 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac3O88895 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hdac3O88895 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.75■□□□□ 0.59
Hdac3O88895 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac3O88895 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac3O88895 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hdac3O88895 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac3O88895 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac3O88895 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac3O88895 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac3O88895 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac3O88895 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac3O88895 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac3O88895 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac3O88895 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac3O88895 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hdac3O88895 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac3O88895 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac3O88895 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac3O88895 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac3O88895 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac3O88895 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hdac3O88895 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac3O88895 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
Hdac3O88895 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac3O88895 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac3O88895 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.72■□□□□ 0.59
Hdac3O88895 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.72■□□□□ 0.59
Hdac3O88895 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac3O88895 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hdac3O88895 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac3O88895 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac3O88895 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.71■□□□□ 0.59
Hdac3O88895 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac3O88895 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.71■□□□□ 0.59
Hdac3O88895 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac3O88895 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac3O88895 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac3O88895 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac3O88895 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac3O88895 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.7■□□□□ 0.58
Hdac3O88895 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Hdac3O88895 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac3O88895 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac3O88895 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Hdac3O88895 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac3O88895 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac3O88895 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac3O88895 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Hdac3O88895 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms