Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnkO88874 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.62■□□□□ 0.57
CcnkO88874 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnkO88874 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CcnkO88874 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnkO88874 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnkO88874 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CcnkO88874 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.61■□□□□ 0.57
CcnkO88874 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnkO88874 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnkO88874 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.61■□□□□ 0.57
CcnkO88874 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnkO88874 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnkO88874 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnkO88874 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnkO88874 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.6■□□□□ 0.57
CcnkO88874 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnkO88874 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnkO88874 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnkO88874 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnkO88874 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CcnkO88874 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CcnkO88874 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnkO88874 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CcnkO88874 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CcnkO88874 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CcnkO88874 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CcnkO88874 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnkO88874 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CcnkO88874 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnkO88874 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnkO88874 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CcnkO88874 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CcnkO88874 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CcnkO88874 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CcnkO88874 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.58■□□□□ 0.56
CcnkO88874 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CcnkO88874 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CcnkO88874 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CcnkO88874 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CcnkO88874 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnkO88874 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnkO88874 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnkO88874 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CcnkO88874 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnkO88874 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.57■□□□□ 0.56
CcnkO88874 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.57■□□□□ 0.56
CcnkO88874 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnkO88874 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.57■□□□□ 0.56
CcnkO88874 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnkO88874 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CcnkO88874 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CcnkO88874 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnkO88874 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CcnkO88874 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.56■□□□□ 0.56
CcnkO88874 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CcnkO88874 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CcnkO88874 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CcnkO88874 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CcnkO88874 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CcnkO88874 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.55■□□□□ 0.56
CcnkO88874 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CcnkO88874 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CcnkO88874 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CcnkO88874 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CcnkO88874 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CcnkO88874 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CcnkO88874 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.54■□□□□ 0.56
CcnkO88874 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CcnkO88874 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.54■□□□□ 0.56
CcnkO88874 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CcnkO88874 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CcnkO88874 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.54■□□□□ 0.56
CcnkO88874 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CcnkO88874 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CcnkO88874 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CcnkO88874 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CcnkO88874 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CcnkO88874 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CcnkO88874 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CcnkO88874 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CcnkO88874 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CcnkO88874 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CcnkO88874 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CcnkO88874 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CcnkO88874 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CcnkO88874 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CcnkO88874 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CcnkO88874 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CcnkO88874 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CcnkO88874 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CcnkO88874 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CcnkO88874 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
CcnkO88874 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CcnkO88874 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.5■□□□□ 0.55
CcnkO88874 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.5■□□□□ 0.55
CcnkO88874 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.5■□□□□ 0.55
CcnkO88874 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CcnkO88874 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.5■□□□□ 0.55
CcnkO88874 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms