Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tulp3O88413 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tulp3O88413 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.71■□□□□ 0.75
Tulp3O88413 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tulp3O88413 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tulp3O88413 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tulp3O88413 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.7■□□□□ 0.74
Tulp3O88413 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tulp3O88413 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tulp3O88413 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tulp3O88413 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tulp3O88413 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tulp3O88413 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.7■□□□□ 0.74
Tulp3O88413 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tulp3O88413 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tulp3O88413 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tulp3O88413 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tulp3O88413 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Tulp3O88413 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tulp3O88413 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tulp3O88413 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tulp3O88413 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tulp3O88413 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tulp3O88413 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tulp3O88413 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Tulp3O88413 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
Tulp3O88413 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.68■□□□□ 0.74
Tulp3O88413 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tulp3O88413 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Tulp3O88413 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tulp3O88413 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.67■□□□□ 0.74
Tulp3O88413 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tulp3O88413 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tulp3O88413 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tulp3O88413 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tulp3O88413 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.67■□□□□ 0.74
Tulp3O88413 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tulp3O88413 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tulp3O88413 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tulp3O88413 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.66■□□□□ 0.74
Tulp3O88413 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tulp3O88413 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tulp3O88413 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.66■□□□□ 0.74
Tulp3O88413 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tulp3O88413 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tulp3O88413 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tulp3O88413 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tulp3O88413 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tulp3O88413 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tulp3O88413 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Tulp3O88413 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tulp3O88413 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tulp3O88413 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.65■□□□□ 0.74
Tulp3O88413 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tulp3O88413 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Tulp3O88413 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tulp3O88413 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tulp3O88413 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.64■□□□□ 0.73
Tulp3O88413 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tulp3O88413 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tulp3O88413 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tulp3O88413 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tulp3O88413 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tulp3O88413 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tulp3O88413 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tulp3O88413 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.63■□□□□ 0.73
Tulp3O88413 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.63■□□□□ 0.73
Tulp3O88413 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.63■□□□□ 0.73
Tulp3O88413 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tulp3O88413 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tulp3O88413 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tulp3O88413 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Tulp3O88413 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tulp3O88413 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.62■□□□□ 0.73
Tulp3O88413 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tulp3O88413 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tulp3O88413 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tulp3O88413 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.61■□□□□ 0.73
Tulp3O88413 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tulp3O88413 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tulp3O88413 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tulp3O88413 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tulp3O88413 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tulp3O88413 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tulp3O88413 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Tulp3O88413 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tulp3O88413 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tulp3O88413 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tulp3O88413 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tulp3O88413 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Tulp3O88413 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tulp3O88413 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tulp3O88413 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tulp3O88413 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tulp3O88413 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Tulp3O88413 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Tulp3O88413 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tulp3O88413 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tulp3O88413 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tulp3O88413 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms