Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ubr1O70481 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Ubr1O70481 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Ubr1O70481 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ubr1O70481 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ubr1O70481 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Ubr1O70481 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ubr1O70481 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ubr1O70481 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Ubr1O70481 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Ubr1O70481 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ubr1O70481 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Ubr1O70481 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ubr1O70481 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC28.22■■■□□ 2.11
Ubr1O70481 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ubr1O70481 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Ubr1O70481 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Ubr1O70481 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Ubr1O70481 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC28.2■■■□□ 2.11
Ubr1O70481 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ubr1O70481 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ubr1O70481 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Ubr1O70481 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC28.19■■■□□ 2.1
Ubr1O70481 AC116713.1-201ENSMUST00000215074 430 ntBASIC28.19■■■□□ 2.1
Ubr1O70481 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ubr1O70481 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ubr1O70481 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ubr1O70481 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Ubr1O70481 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Ubr1O70481 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ubr1O70481 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ubr1O70481 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC28.18■■■□□ 2.1
Ubr1O70481 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Ubr1O70481 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
Ubr1O70481 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC28.17■■■□□ 2.1
Ubr1O70481 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Ubr1O70481 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ubr1O70481 Gm12821-201ENSMUST00000120022 600 ntBASIC28.16■■■□□ 2.1
Ubr1O70481 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC28.16■■■□□ 2.1
Ubr1O70481 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Ubr1O70481 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
Ubr1O70481 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
Ubr1O70481 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ubr1O70481 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ubr1O70481 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC28.15■■■□□ 2.1
Ubr1O70481 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC28.15■■■□□ 2.1
Ubr1O70481 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ubr1O70481 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Ubr1O70481 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ubr1O70481 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC28.14■■■□□ 2.1
Ubr1O70481 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ubr1O70481 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
Ubr1O70481 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Ubr1O70481 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ubr1O70481 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ubr1O70481 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC28.13■■■□□ 2.09
Ubr1O70481 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ubr1O70481 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC28.13■■■□□ 2.09
Ubr1O70481 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Ubr1O70481 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Ubr1O70481 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ubr1O70481 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC28.12■■■□□ 2.09
Ubr1O70481 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ubr1O70481 Serp2-204ENSMUST00000228055 705 ntBASIC28.11■■■□□ 2.09
Ubr1O70481 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC28.1■■■□□ 2.09
Ubr1O70481 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
Ubr1O70481 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ubr1O70481 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Ubr1O70481 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ubr1O70481 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ubr1O70481 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC28.09■■■□□ 2.09
Ubr1O70481 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ubr1O70481 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Ubr1O70481 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC28.08■■■□□ 2.09
Ubr1O70481 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Ubr1O70481 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Ubr1O70481 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ubr1O70481 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ubr1O70481 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
Ubr1O70481 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ubr1O70481 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Ubr1O70481 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ubr1O70481 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ubr1O70481 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ubr1O70481 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Ubr1O70481 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC28.04■■■□□ 2.08
Ubr1O70481 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Ubr1O70481 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Ubr1O70481 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ubr1O70481 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ubr1O70481 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
Ubr1O70481 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Ubr1O70481 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC28.04■■■□□ 2.08
Ubr1O70481 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ubr1O70481 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ubr1O70481 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ubr1O70481 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC28.03■■■□□ 2.08
Ubr1O70481 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Ubr1O70481 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ubr1O70481 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms