Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Nr1i3O35627 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Nr1i3O35627 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.81■■□□□ 1.24
Nr1i3O35627 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Nr1i3O35627 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nr1i3O35627 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Nr1i3O35627 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nr1i3O35627 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nr1i3O35627 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Nr1i3O35627 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.81■■□□□ 1.24
Nr1i3O35627 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.8■■□□□ 1.24
Nr1i3O35627 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.8■■□□□ 1.24
Nr1i3O35627 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
Nr1i3O35627 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.8■■□□□ 1.24
Nr1i3O35627 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nr1i3O35627 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nr1i3O35627 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nr1i3O35627 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nr1i3O35627 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nr1i3O35627 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.79■■□□□ 1.24
Nr1i3O35627 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nr1i3O35627 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nr1i3O35627 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nr1i3O35627 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Nr1i3O35627 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Nr1i3O35627 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Nr1i3O35627 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nr1i3O35627 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nr1i3O35627 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nr1i3O35627 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nr1i3O35627 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nr1i3O35627 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nr1i3O35627 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.77■■□□□ 1.24
Nr1i3O35627 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Nr1i3O35627 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.77■■□□□ 1.24
Nr1i3O35627 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Nr1i3O35627 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.77■■□□□ 1.24
Nr1i3O35627 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nr1i3O35627 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nr1i3O35627 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nr1i3O35627 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.76■■□□□ 1.23
Nr1i3O35627 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Nr1i3O35627 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.76■■□□□ 1.23
Nr1i3O35627 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nr1i3O35627 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.75■■□□□ 1.23
Nr1i3O35627 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.75■■□□□ 1.23
Nr1i3O35627 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nr1i3O35627 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nr1i3O35627 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nr1i3O35627 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nr1i3O35627 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Nr1i3O35627 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Nr1i3O35627 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.74■■□□□ 1.23
Nr1i3O35627 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.74■■□□□ 1.23
Nr1i3O35627 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.74■■□□□ 1.23
Nr1i3O35627 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.73■■□□□ 1.23
Nr1i3O35627 Gm12366-201ENSMUST00000121722 873 ntBASIC22.73■■□□□ 1.23
Nr1i3O35627 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.73■■□□□ 1.23
Nr1i3O35627 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.73■■□□□ 1.23
Nr1i3O35627 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.73■■□□□ 1.23
Nr1i3O35627 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.73■■□□□ 1.23
Nr1i3O35627 Gm5786-201ENSMUST00000085368 882 ntBASIC22.73■■□□□ 1.23
Nr1i3O35627 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Nr1i3O35627 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.72■■□□□ 1.23
Nr1i3O35627 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nr1i3O35627 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.72■■□□□ 1.23
Nr1i3O35627 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nr1i3O35627 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nr1i3O35627 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.72■■□□□ 1.23
Nr1i3O35627 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nr1i3O35627 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Nr1i3O35627 Mir6538-201ENSMUST00000183713 110 ntBASIC22.71■■□□□ 1.23
Nr1i3O35627 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Nr1i3O35627 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Nr1i3O35627 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nr1i3O35627 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nr1i3O35627 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Nr1i3O35627 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nr1i3O35627 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Nr1i3O35627 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Nr1i3O35627 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.69■■□□□ 1.22
Nr1i3O35627 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nr1i3O35627 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Nr1i3O35627 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
Nr1i3O35627 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.69■■□□□ 1.22
Nr1i3O35627 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Nr1i3O35627 Gm10420-201ENSMUST00000121713 882 ntBASIC22.69■■□□□ 1.22
Nr1i3O35627 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Nr1i3O35627 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.69■■□□□ 1.22
Nr1i3O35627 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nr1i3O35627 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms