Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.53■□□□□ 0.88
Abca4O35600 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.53■□□□□ 0.88
Abca4O35600 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.53■□□□□ 0.88
Abca4O35600 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abca4O35600 Gm12251-201ENSMUST00000117893 792 ntBASIC20.53■□□□□ 0.88
Abca4O35600 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.53■□□□□ 0.88
Abca4O35600 Gm10033-202ENSMUST00000211874 928 ntBASIC20.53■□□□□ 0.88
Abca4O35600 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abca4O35600 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abca4O35600 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.52■□□□□ 0.88
Abca4O35600 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abca4O35600 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Abca4O35600 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Abca4O35600 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Abca4O35600 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Abca4O35600 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abca4O35600 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.51■□□□□ 0.87
Abca4O35600 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.51■□□□□ 0.87
Abca4O35600 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.51■□□□□ 0.87
Abca4O35600 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abca4O35600 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Abca4O35600 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abca4O35600 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abca4O35600 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Abca4O35600 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Abca4O35600 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.5■□□□□ 0.87
Abca4O35600 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Abca4O35600 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Abca4O35600 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Abca4O35600 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Abca4O35600 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.48■□□□□ 0.87
Abca4O35600 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Abca4O35600 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Abca4O35600 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Abca4O35600 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Abca4O35600 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Abca4O35600 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Abca4O35600 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Abca4O35600 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.47■□□□□ 0.87
Abca4O35600 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.47■□□□□ 0.87
Abca4O35600 AV356131-201ENSMUST00000206201 750 ntBASIC20.47■□□□□ 0.87
Abca4O35600 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Abca4O35600 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Abca4O35600 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Abca4O35600 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Abca4O35600 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Abca4O35600 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.45■□□□□ 0.87
Abca4O35600 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
Abca4O35600 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Abca4O35600 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Abca4O35600 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Abca4O35600 Gm26833-201ENSMUST00000180899 440 ntBASIC20.45■□□□□ 0.86
Abca4O35600 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Abca4O35600 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.44■□□□□ 0.86
Abca4O35600 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Abca4O35600 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Abca4O35600 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.43■□□□□ 0.86
Abca4O35600 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Abca4O35600 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Abca4O35600 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Abca4O35600 Zxda-201ENSMUST00000117281 2621 ntBASIC20.43■□□□□ 0.86
Abca4O35600 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Abca4O35600 Gm12933-201ENSMUST00000120203 872 ntBASIC20.42■□□□□ 0.86
Abca4O35600 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Abca4O35600 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Abca4O35600 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.42■□□□□ 0.86
Abca4O35600 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Abca4O35600 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abca4O35600 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Abca4O35600 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abca4O35600 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Abca4O35600 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abca4O35600 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.4■□□□□ 0.86
Abca4O35600 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abca4O35600 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Abca4O35600 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.4■□□□□ 0.86
Abca4O35600 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abca4O35600 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Abca4O35600 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.39■□□□□ 0.86
Abca4O35600 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Abca4O35600 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.39■□□□□ 0.85
Abca4O35600 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.39■□□□□ 0.85
Abca4O35600 Mir7071-201ENSMUST00000184847 69 ntBASIC20.39■□□□□ 0.85
Abca4O35600 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.39■□□□□ 0.85
Abca4O35600 Gm43060-201ENSMUST00000200621 289 ntBASIC20.39■□□□□ 0.85
Abca4O35600 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Abca4O35600 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Abca4O35600 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.38■□□□□ 0.85
Abca4O35600 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.38■□□□□ 0.85
Abca4O35600 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Abca4O35600 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Abca4O35600 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.38■□□□□ 0.85
Abca4O35600 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Abca4O35600 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Abca4O35600 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abca4O35600 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abca4O35600 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abca4O35600 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abca4O35600 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abca4O35600 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms