Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptch2O35595 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptch2O35595 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.74■■□□□ 1.07
Ptch2O35595 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.74■■□□□ 1.07
Ptch2O35595 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptch2O35595 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptch2O35595 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Ptch2O35595 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.73■■□□□ 1.07
Ptch2O35595 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch2O35595 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch2O35595 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ptch2O35595 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.72■■□□□ 1.07
Ptch2O35595 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch2O35595 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch2O35595 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch2O35595 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch2O35595 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch2O35595 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Ptch2O35595 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch2O35595 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch2O35595 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.71■■□□□ 1.07
Ptch2O35595 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch2O35595 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch2O35595 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch2O35595 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.7■■□□□ 1.06
Ptch2O35595 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch2O35595 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptch2O35595 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptch2O35595 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch2O35595 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch2O35595 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.69■■□□□ 1.06
Ptch2O35595 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch2O35595 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch2O35595 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch2O35595 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch2O35595 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.68■■□□□ 1.06
Ptch2O35595 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.68■■□□□ 1.06
Ptch2O35595 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.68■■□□□ 1.06
Ptch2O35595 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch2O35595 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch2O35595 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch2O35595 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ptch2O35595 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch2O35595 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch2O35595 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.67■■□□□ 1.06
Ptch2O35595 Gm12922-201ENSMUST00000120626 809 ntBASIC21.67■■□□□ 1.06
Ptch2O35595 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.67■■□□□ 1.06
Ptch2O35595 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.67■■□□□ 1.06
Ptch2O35595 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.67■■□□□ 1.06
Ptch2O35595 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch2O35595 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch2O35595 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ptch2O35595 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch2O35595 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Ptch2O35595 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch2O35595 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch2O35595 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch2O35595 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch2O35595 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.65■■□□□ 1.06
Ptch2O35595 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch2O35595 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch2O35595 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.65■■□□□ 1.06
Ptch2O35595 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptch2O35595 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptch2O35595 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptch2O35595 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch2O35595 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch2O35595 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch2O35595 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch2O35595 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch2O35595 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch2O35595 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch2O35595 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch2O35595 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch2O35595 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch2O35595 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch2O35595 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch2O35595 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ptch2O35595 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch2O35595 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ptch2O35595 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ptch2O35595 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ptch2O35595 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.62■■□□□ 1.05
Ptch2O35595 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptch2O35595 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
Ptch2O35595 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Ptch2O35595 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.62■■□□□ 1.05
Ptch2O35595 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.62■■□□□ 1.05
Ptch2O35595 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptch2O35595 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ptch2O35595 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptch2O35595 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptch2O35595 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.61■■□□□ 1.05
Ptch2O35595 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptch2O35595 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptch2O35595 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ptch2O35595 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptch2O35595 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptch2O35595 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptch2O35595 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms