Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Capn1O35350 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Capn1O35350 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Capn1O35350 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Capn1O35350 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Capn1O35350 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Capn1O35350 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Capn1O35350 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.47■□□□□ 0.71
Capn1O35350 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Capn1O35350 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Capn1O35350 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Capn1O35350 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Capn1O35350 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Capn1O35350 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Capn1O35350 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Capn1O35350 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.46■□□□□ 0.71
Capn1O35350 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.46■□□□□ 0.71
Capn1O35350 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Capn1O35350 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Capn1O35350 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Capn1O35350 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Capn1O35350 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Capn1O35350 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.45■□□□□ 0.7
Capn1O35350 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Capn1O35350 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Capn1O35350 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Capn1O35350 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Capn1O35350 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Capn1O35350 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Capn1O35350 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Capn1O35350 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Capn1O35350 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Capn1O35350 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Capn1O35350 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.44■□□□□ 0.7
Capn1O35350 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.44■□□□□ 0.7
Capn1O35350 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Capn1O35350 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Capn1O35350 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Capn1O35350 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.43■□□□□ 0.7
Capn1O35350 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.43■□□□□ 0.7
Capn1O35350 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Capn1O35350 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.43■□□□□ 0.7
Capn1O35350 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Capn1O35350 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Capn1O35350 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.43■□□□□ 0.7
Capn1O35350 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Capn1O35350 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capn1O35350 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Capn1O35350 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
Capn1O35350 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.42■□□□□ 0.7
Capn1O35350 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.42■□□□□ 0.7
Capn1O35350 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Capn1O35350 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capn1O35350 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capn1O35350 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capn1O35350 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Capn1O35350 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Capn1O35350 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Capn1O35350 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.41■□□□□ 0.7
Capn1O35350 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Capn1O35350 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Capn1O35350 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Capn1O35350 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Capn1O35350 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Capn1O35350 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Capn1O35350 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Capn1O35350 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Capn1O35350 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Capn1O35350 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Capn1O35350 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Capn1O35350 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Capn1O35350 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.39■□□□□ 0.69
Capn1O35350 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.39■□□□□ 0.69
Capn1O35350 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.39■□□□□ 0.69
Capn1O35350 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Capn1O35350 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.39■□□□□ 0.69
Capn1O35350 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Capn1O35350 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Capn1O35350 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.38■□□□□ 0.69
Capn1O35350 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.38■□□□□ 0.69
Capn1O35350 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Capn1O35350 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Capn1O35350 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Capn1O35350 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.37■□□□□ 0.69
Capn1O35350 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Capn1O35350 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Capn1O35350 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.37■□□□□ 0.69
Capn1O35350 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.37■□□□□ 0.69
Capn1O35350 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.37■□□□□ 0.69
Capn1O35350 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Capn1O35350 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Capn1O35350 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Capn1O35350 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Capn1O35350 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Capn1O35350 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Capn1O35350 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Capn1O35350 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms