Protein–RNA interactions for Protein: O09061

Psmb1, Proteasome subunit beta type-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb1O09061 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Psmb1O09061 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Psmb1O09061 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Psmb1O09061 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.2■□□□□ 0.66
Psmb1O09061 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Psmb1O09061 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Psmb1O09061 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Psmb1O09061 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.2■□□□□ 0.66
Psmb1O09061 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.2■□□□□ 0.66
Psmb1O09061 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Psmb1O09061 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Psmb1O09061 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Psmb1O09061 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Psmb1O09061 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Psmb1O09061 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Psmb1O09061 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.18■□□□□ 0.66
Psmb1O09061 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Psmb1O09061 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.18■□□□□ 0.66
Psmb1O09061 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Psmb1O09061 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Psmb1O09061 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Psmb1O09061 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Psmb1O09061 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Psmb1O09061 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.17■□□□□ 0.66
Psmb1O09061 Gm7417-201ENSMUST00000192950 473 ntBASIC19.17■□□□□ 0.66
Psmb1O09061 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Psmb1O09061 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Psmb1O09061 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Psmb1O09061 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Psmb1O09061 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Psmb1O09061 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.16■□□□□ 0.66
Psmb1O09061 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Psmb1O09061 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Psmb1O09061 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.16■□□□□ 0.66
Psmb1O09061 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Psmb1O09061 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.16■□□□□ 0.66
Psmb1O09061 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.16■□□□□ 0.66
Psmb1O09061 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Psmb1O09061 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.16■□□□□ 0.66
Psmb1O09061 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Psmb1O09061 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmb1O09061 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmb1O09061 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmb1O09061 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Psmb1O09061 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.15■□□□□ 0.66
Psmb1O09061 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.15■□□□□ 0.66
Psmb1O09061 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.15■□□□□ 0.66
Psmb1O09061 Gm40881-201ENSMUST00000223397 166 ntBASIC19.15■□□□□ 0.66
Psmb1O09061 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Psmb1O09061 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmb1O09061 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmb1O09061 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmb1O09061 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmb1O09061 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Psmb1O09061 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Psmb1O09061 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmb1O09061 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmb1O09061 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Psmb1O09061 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmb1O09061 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmb1O09061 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.14■□□□□ 0.65
Psmb1O09061 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmb1O09061 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Psmb1O09061 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.13■□□□□ 0.65
Psmb1O09061 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Psmb1O09061 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Psmb1O09061 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Psmb1O09061 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmb1O09061 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmb1O09061 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Psmb1O09061 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmb1O09061 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmb1O09061 Gm10399-202ENSMUST00000202768 748 ntBASIC19.12■□□□□ 0.65
Psmb1O09061 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmb1O09061 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmb1O09061 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmb1O09061 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Psmb1O09061 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Psmb1O09061 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Psmb1O09061 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Psmb1O09061 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Psmb1O09061 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Psmb1O09061 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Psmb1O09061 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Psmb1O09061 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.11■□□□□ 0.65
Psmb1O09061 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.11■□□□□ 0.65
Psmb1O09061 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Psmb1O09061 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Psmb1O09061 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Psmb1O09061 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Psmb1O09061 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Psmb1O09061 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.1■□□□□ 0.65
Psmb1O09061 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Psmb1O09061 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
Psmb1O09061 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Psmb1O09061 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.1■□□□□ 0.65
Psmb1O09061 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Psmb1O09061 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Psmb1O09061 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Psmb1O09061 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms