Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.79■□□□□ 0.6
Raet1aO08602 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1aO08602 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1aO08602 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1aO08602 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Raet1aO08602 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.78■□□□□ 0.6
Raet1aO08602 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1aO08602 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1aO08602 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.78■□□□□ 0.6
Raet1aO08602 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.78■□□□□ 0.6
Raet1aO08602 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1aO08602 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1aO08602 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1aO08602 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Raet1aO08602 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.77■□□□□ 0.6
Raet1aO08602 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1aO08602 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1aO08602 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.77■□□□□ 0.6
Raet1aO08602 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1aO08602 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1aO08602 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.77■□□□□ 0.6
Raet1aO08602 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1aO08602 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1aO08602 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1aO08602 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1aO08602 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1aO08602 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1aO08602 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1aO08602 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1aO08602 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1aO08602 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.75■□□□□ 0.59
Raet1aO08602 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1aO08602 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1aO08602 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1aO08602 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1aO08602 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.74■□□□□ 0.59
Raet1aO08602 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.74■□□□□ 0.59
Raet1aO08602 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1aO08602 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.74■□□□□ 0.59
Raet1aO08602 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1aO08602 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Raet1aO08602 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Raet1aO08602 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1aO08602 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Raet1aO08602 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.73■□□□□ 0.59
Raet1aO08602 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Raet1aO08602 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1aO08602 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Raet1aO08602 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1aO08602 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1aO08602 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1aO08602 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1aO08602 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Raet1aO08602 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1aO08602 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1aO08602 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1aO08602 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Raet1aO08602 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1aO08602 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.71■□□□□ 0.59
Raet1aO08602 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.71■□□□□ 0.59
Raet1aO08602 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1aO08602 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.7■□□□□ 0.58
Raet1aO08602 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Raet1aO08602 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.7■□□□□ 0.58
Raet1aO08602 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Raet1aO08602 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.7■□□□□ 0.58
Raet1aO08602 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.7■□□□□ 0.58
Raet1aO08602 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.7■□□□□ 0.58
Raet1aO08602 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1aO08602 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1aO08602 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1aO08602 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1aO08602 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Raet1aO08602 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.69■□□□□ 0.58
Raet1aO08602 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1aO08602 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1aO08602 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1aO08602 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1aO08602 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1aO08602 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1aO08602 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1aO08602 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1aO08602 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.67■□□□□ 0.58
Raet1aO08602 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.67■□□□□ 0.58
Raet1aO08602 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1aO08602 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1aO08602 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.67■□□□□ 0.58
Raet1aO08602 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1aO08602 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Raet1aO08602 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms