Protein–RNA interactions for Protein: K7N6V4

Gm3642, Predicted gene 3642, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3642K7N6V4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3642K7N6V4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3642K7N6V4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Gm3642K7N6V4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3642K7N6V4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3642K7N6V4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Gm3642K7N6V4 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.14■■□□□ 1.14
Gm3642K7N6V4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.14■■□□□ 1.13
Gm3642K7N6V4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3642K7N6V4 Gm12922-201ENSMUST00000120626 809 ntBASIC22.14■■□□□ 1.13
Gm3642K7N6V4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3642K7N6V4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3642K7N6V4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3642K7N6V4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3642K7N6V4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Gm3642K7N6V4 Gm21956-201ENSMUST00000179946 522 ntBASIC22.13■■□□□ 1.13
Gm3642K7N6V4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.13■■□□□ 1.13
Gm3642K7N6V4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Gm3642K7N6V4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Gm3642K7N6V4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm3642K7N6V4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm3642K7N6V4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3642K7N6V4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.12■■□□□ 1.13
Gm3642K7N6V4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3642K7N6V4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3642K7N6V4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3642K7N6V4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3642K7N6V4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.1■■□□□ 1.13
Gm3642K7N6V4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm3642K7N6V4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
Gm3642K7N6V4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Gm3642K7N6V4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.07■■□□□ 1.12
Gm3642K7N6V4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.07■■□□□ 1.12
Gm3642K7N6V4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Gm3642K7N6V4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3642K7N6V4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3642K7N6V4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3642K7N6V4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Gm3642K7N6V4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3642K7N6V4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3642K7N6V4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3642K7N6V4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3642K7N6V4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Gm3642K7N6V4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.06■■□□□ 1.12
Gm3642K7N6V4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3642K7N6V4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3642K7N6V4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.06■■□□□ 1.12
Gm3642K7N6V4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm3642K7N6V4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.05■■□□□ 1.12
Gm3642K7N6V4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Gm3642K7N6V4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3642K7N6V4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3642K7N6V4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3642K7N6V4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3642K7N6V4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3642K7N6V4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3642K7N6V4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3642K7N6V4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3642K7N6V4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Gm3642K7N6V4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm3642K7N6V4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Gm3642K7N6V4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Gm3642K7N6V4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.03■■□□□ 1.12
Gm3642K7N6V4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.03■■□□□ 1.12
Gm3642K7N6V4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm3642K7N6V4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Gm3642K7N6V4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm3642K7N6V4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Gm3642K7N6V4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Gm3642K7N6V4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Gm3642K7N6V4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3642K7N6V4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm3642K7N6V4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3642K7N6V4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm3642K7N6V4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.01■■□□□ 1.11
Gm3642K7N6V4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms