Protein–RNA interactions for Protein: F2Z478

Gm11238, Predicted gene 11238, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11238F2Z478 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Gm11238F2Z478 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gm11238F2Z478 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm11238F2Z478 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Gm11238F2Z478 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Gm11238F2Z478 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm11238F2Z478 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Gm11238F2Z478 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
Gm11238F2Z478 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.37■■□□□ 1.17
Gm11238F2Z478 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.36■■□□□ 1.17
Gm11238F2Z478 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.36■■□□□ 1.17
Gm11238F2Z478 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm11238F2Z478 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Gm11238F2Z478 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm11238F2Z478 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm11238F2Z478 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm11238F2Z478 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Gm11238F2Z478 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Gm11238F2Z478 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm11238F2Z478 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm11238F2Z478 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
Gm11238F2Z478 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm11238F2Z478 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.34■■□□□ 1.17
Gm11238F2Z478 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm11238F2Z478 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Gm11238F2Z478 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.33■■□□□ 1.17
Gm11238F2Z478 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.33■■□□□ 1.17
Gm11238F2Z478 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Gm11238F2Z478 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Gm11238F2Z478 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Gm11238F2Z478 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Gm11238F2Z478 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Gm11238F2Z478 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Gm11238F2Z478 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Gm11238F2Z478 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.31■■□□□ 1.16
Gm11238F2Z478 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.31■■□□□ 1.16
Gm11238F2Z478 Gm27454-201ENSMUST00000185090 204 ntBASIC22.31■■□□□ 1.16
Gm11238F2Z478 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm11238F2Z478 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm11238F2Z478 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm11238F2Z478 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm11238F2Z478 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm11238F2Z478 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm11238F2Z478 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm11238F2Z478 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm11238F2Z478 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm11238F2Z478 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.3■■□□□ 1.16
Gm11238F2Z478 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Gm11238F2Z478 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.29■■□□□ 1.16
Gm11238F2Z478 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm11238F2Z478 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm11238F2Z478 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm11238F2Z478 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm11238F2Z478 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm11238F2Z478 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.28■■□□□ 1.16
Gm11238F2Z478 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm11238F2Z478 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm11238F2Z478 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gm11238F2Z478 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Gm11238F2Z478 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Gm11238F2Z478 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Gm11238F2Z478 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.27■■□□□ 1.16
Gm11238F2Z478 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm11238F2Z478 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm11238F2Z478 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm11238F2Z478 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm11238F2Z478 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm11238F2Z478 Gm9870-201ENSMUST00000063874 645 ntBASIC22.26■■□□□ 1.15
Gm11238F2Z478 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm11238F2Z478 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm11238F2Z478 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Gm11238F2Z478 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
Gm11238F2Z478 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11238F2Z478 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11238F2Z478 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11238F2Z478 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11238F2Z478 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11238F2Z478 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm11238F2Z478 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Gm11238F2Z478 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm11238F2Z478 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Gm11238F2Z478 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.23■■□□□ 1.15
Gm11238F2Z478 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm11238F2Z478 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm11238F2Z478 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Gm11238F2Z478 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm11238F2Z478 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
Gm11238F2Z478 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm11238F2Z478 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Gm11238F2Z478 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Gm11238F2Z478 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms