Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC34.68■■■■□ 3.14
Ift140E9PY46 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Ift140E9PY46 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Ift140E9PY46 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Ift140E9PY46 Gm26571-201ENSMUST00000181399 666 ntBASIC34.68■■■■□ 3.14
Ift140E9PY46 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Ift140E9PY46 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Ift140E9PY46 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Ift140E9PY46 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Ift140E9PY46 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
Ift140E9PY46 Wdr70-203ENSMUST00000227371 1130 ntBASIC34.66■■■■□ 3.14
Ift140E9PY46 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Ift140E9PY46 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Ift140E9PY46 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC34.66■■■■□ 3.14
Ift140E9PY46 Gm10849-201ENSMUST00000100397 618 ntBASIC34.65■■■■□ 3.14
Ift140E9PY46 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
Ift140E9PY46 Gm27011-201ENSMUST00000182352 972 ntBASIC34.65■■■■□ 3.14
Ift140E9PY46 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ift140E9PY46 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ift140E9PY46 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ift140E9PY46 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC34.65■■■■□ 3.14
Ift140E9PY46 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
Ift140E9PY46 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Ift140E9PY46 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC34.64■■■■□ 3.14
Ift140E9PY46 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Ift140E9PY46 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
Ift140E9PY46 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC34.64■■■■□ 3.14
Ift140E9PY46 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Ift140E9PY46 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC34.63■■■■□ 3.13
Ift140E9PY46 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC34.63■■■■□ 3.13
Ift140E9PY46 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Ift140E9PY46 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Ift140E9PY46 Gm27405-201ENSMUST00000184201 112 ntBASIC34.62■■■■□ 3.13
Ift140E9PY46 Krt8-ps-201ENSMUST00000208495 945 ntBASIC34.62■■■■□ 3.13
Ift140E9PY46 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Ift140E9PY46 Gm12251-201ENSMUST00000117893 792 ntBASIC34.61■■■■□ 3.13
Ift140E9PY46 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC34.6■■■■□ 3.13
Ift140E9PY46 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC34.6■■■■□ 3.13
Ift140E9PY46 AC112142.1-201ENSMUST00000228796 918 ntBASIC34.6■■■■□ 3.13
Ift140E9PY46 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC34.59■■■■□ 3.13
Ift140E9PY46 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Ift140E9PY46 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Ift140E9PY46 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC34.58■■■■□ 3.13
Ift140E9PY46 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Ift140E9PY46 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
Ift140E9PY46 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
Ift140E9PY46 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC34.57■■■■□ 3.12
Ift140E9PY46 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
Ift140E9PY46 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
Ift140E9PY46 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
Ift140E9PY46 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Ift140E9PY46 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Ift140E9PY46 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC34.56■■■■□ 3.12
Ift140E9PY46 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC34.55■■■■□ 3.12
Ift140E9PY46 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Ift140E9PY46 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC34.55■■■■□ 3.12
Ift140E9PY46 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
Ift140E9PY46 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC34.55■■■■□ 3.12
Ift140E9PY46 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Ift140E9PY46 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Ift140E9PY46 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Ift140E9PY46 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Ift140E9PY46 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Ift140E9PY46 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC34.53■■■■□ 3.12
Ift140E9PY46 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Ift140E9PY46 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC34.53■■■■□ 3.12
Ift140E9PY46 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Ift140E9PY46 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
Ift140E9PY46 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Ift140E9PY46 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC34.52■■■■□ 3.12
Ift140E9PY46 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Ift140E9PY46 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Ift140E9PY46 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Ift140E9PY46 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC34.51■■■■□ 3.12
Ift140E9PY46 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Ift140E9PY46 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Ift140E9PY46 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Ift140E9PY46 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Ift140E9PY46 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Ift140E9PY46 Gm37179-201ENSMUST00000194862 823 ntBASIC34.5■■■■□ 3.11
Ift140E9PY46 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
Ift140E9PY46 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
Ift140E9PY46 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Ift140E9PY46 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC34.49■■■■□ 3.11
Ift140E9PY46 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC34.49■■■■□ 3.11
Ift140E9PY46 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Ift140E9PY46 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Ift140E9PY46 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Ift140E9PY46 Gm8770-201ENSMUST00000121113 1109 ntBASIC34.48■■■■□ 3.11
Ift140E9PY46 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC34.48■■■■□ 3.11
Ift140E9PY46 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC34.48■■■■□ 3.11
Ift140E9PY46 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC34.47■■■■□ 3.11
Ift140E9PY46 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC34.47■■■■□ 3.11
Ift140E9PY46 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC34.46■■■■□ 3.11
Ift140E9PY46 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Ift140E9PY46 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC34.46■■■■□ 3.11
Ift140E9PY46 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Ift140E9PY46 Gm42569-201ENSMUST00000200539 472 ntBASIC34.46■■■■□ 3.11
Ift140E9PY46 Gm5576-201ENSMUST00000075809 1236 ntBASIC34.46■■■■□ 3.11
Ift140E9PY46 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC34.46■■■■□ 3.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms