Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col6a3E9PWQ3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col6a3E9PWQ3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col6a3E9PWQ3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.03■■□□□ 1.12
Col6a3E9PWQ3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col6a3E9PWQ3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col6a3E9PWQ3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.03■■□□□ 1.12
Col6a3E9PWQ3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col6a3E9PWQ3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.03■■□□□ 1.12
Col6a3E9PWQ3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col6a3E9PWQ3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col6a3E9PWQ3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col6a3E9PWQ3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.02■■□□□ 1.12
Col6a3E9PWQ3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
Col6a3E9PWQ3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col6a3E9PWQ3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col6a3E9PWQ3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col6a3E9PWQ3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22■■□□□ 1.11
Col6a3E9PWQ3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22■■□□□ 1.11
Col6a3E9PWQ3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Col6a3E9PWQ3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Col6a3E9PWQ3 Gm10602-201ENSMUST00000098239 609 ntBASIC22■■□□□ 1.11
Col6a3E9PWQ3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Col6a3E9PWQ3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Col6a3E9PWQ3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col6a3E9PWQ3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
Col6a3E9PWQ3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col6a3E9PWQ3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col6a3E9PWQ3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col6a3E9PWQ3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col6a3E9PWQ3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.98■■□□□ 1.11
Col6a3E9PWQ3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Col6a3E9PWQ3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Col6a3E9PWQ3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.97■■□□□ 1.11
Col6a3E9PWQ3 Gm12251-201ENSMUST00000117893 792 ntBASIC21.97■■□□□ 1.11
Col6a3E9PWQ3 Gm10033-202ENSMUST00000211874 928 ntBASIC21.97■■□□□ 1.11
Col6a3E9PWQ3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col6a3E9PWQ3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
Col6a3E9PWQ3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Col6a3E9PWQ3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col6a3E9PWQ3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
Col6a3E9PWQ3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.96■■□□□ 1.11
Col6a3E9PWQ3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col6a3E9PWQ3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col6a3E9PWQ3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.95■■□□□ 1.1
Col6a3E9PWQ3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.95■■□□□ 1.1
Col6a3E9PWQ3 Gm12933-201ENSMUST00000120203 872 ntBASIC21.95■■□□□ 1.1
Col6a3E9PWQ3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col6a3E9PWQ3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col6a3E9PWQ3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Col6a3E9PWQ3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.94■■□□□ 1.1
Col6a3E9PWQ3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.94■■□□□ 1.1
Col6a3E9PWQ3 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.94■■□□□ 1.1
Col6a3E9PWQ3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.93■■□□□ 1.1
Col6a3E9PWQ3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col6a3E9PWQ3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col6a3E9PWQ3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.93■■□□□ 1.1
Col6a3E9PWQ3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Col6a3E9PWQ3 Gm43060-201ENSMUST00000200621 289 ntBASIC21.93■■□□□ 1.1
Col6a3E9PWQ3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col6a3E9PWQ3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.92■■□□□ 1.1
Col6a3E9PWQ3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col6a3E9PWQ3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col6a3E9PWQ3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.92■■□□□ 1.1
Col6a3E9PWQ3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col6a3E9PWQ3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col6a3E9PWQ3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.91■■□□□ 1.1
Col6a3E9PWQ3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Col6a3E9PWQ3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col6a3E9PWQ3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col6a3E9PWQ3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col6a3E9PWQ3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col6a3E9PWQ3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col6a3E9PWQ3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col6a3E9PWQ3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Col6a3E9PWQ3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col6a3E9PWQ3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col6a3E9PWQ3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.89■■□□□ 1.09
Col6a3E9PWQ3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col6a3E9PWQ3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col6a3E9PWQ3 Gm22240-201ENSMUST00000175225 82 ntBASIC21.89■■□□□ 1.09
Col6a3E9PWQ3 AV356131-201ENSMUST00000206201 750 ntBASIC21.89■■□□□ 1.09
Col6a3E9PWQ3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col6a3E9PWQ3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.89■■□□□ 1.09
Col6a3E9PWQ3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Col6a3E9PWQ3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Col6a3E9PWQ3 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.88■■□□□ 1.09
Col6a3E9PWQ3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.88■■□□□ 1.09
Col6a3E9PWQ3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col6a3E9PWQ3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col6a3E9PWQ3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.87■■□□□ 1.09
Col6a3E9PWQ3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Col6a3E9PWQ3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col6a3E9PWQ3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col6a3E9PWQ3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col6a3E9PWQ3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col6a3E9PWQ3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Col6a3E9PWQ3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
Col6a3E9PWQ3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col6a3E9PWQ3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms