Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank1D3YZU1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank1D3YZU1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.03■□□□□ 0.64
Shank1D3YZU1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shank1D3YZU1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shank1D3YZU1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shank1D3YZU1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shank1D3YZU1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Shank1D3YZU1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shank1D3YZU1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shank1D3YZU1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shank1D3YZU1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank1D3YZU1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.01■□□□□ 0.63
Shank1D3YZU1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shank1D3YZU1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank1D3YZU1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank1D3YZU1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank1D3YZU1 Gm43137-201ENSMUST00000198052 594 ntBASIC19■□□□□ 0.63
Shank1D3YZU1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank1D3YZU1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Shank1D3YZU1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank1D3YZU1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19■□□□□ 0.63
Shank1D3YZU1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Shank1D3YZU1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank1D3YZU1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank1D3YZU1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank1D3YZU1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.99■□□□□ 0.63
Shank1D3YZU1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank1D3YZU1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank1D3YZU1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Shank1D3YZU1 Gm43017-201ENSMUST00000198296 752 ntBASIC18.98■□□□□ 0.63
Shank1D3YZU1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank1D3YZU1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank1D3YZU1 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.98■□□□□ 0.63
Shank1D3YZU1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank1D3YZU1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.98■□□□□ 0.63
Shank1D3YZU1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank1D3YZU1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank1D3YZU1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Shank1D3YZU1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank1D3YZU1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Shank1D3YZU1 Gm26571-201ENSMUST00000181399 666 ntBASIC18.97■□□□□ 0.63
Shank1D3YZU1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank1D3YZU1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank1D3YZU1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank1D3YZU1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank1D3YZU1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank1D3YZU1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.96■□□□□ 0.63
Shank1D3YZU1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.96■□□□□ 0.63
Shank1D3YZU1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Shank1D3YZU1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Shank1D3YZU1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Shank1D3YZU1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Shank1D3YZU1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shank1D3YZU1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shank1D3YZU1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Shank1D3YZU1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shank1D3YZU1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shank1D3YZU1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Shank1D3YZU1 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.95■□□□□ 0.62
Shank1D3YZU1 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.95■□□□□ 0.62
Shank1D3YZU1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shank1D3YZU1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shank1D3YZU1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Shank1D3YZU1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Shank1D3YZU1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Shank1D3YZU1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Shank1D3YZU1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.94■□□□□ 0.62
Shank1D3YZU1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shank1D3YZU1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shank1D3YZU1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shank1D3YZU1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Shank1D3YZU1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shank1D3YZU1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shank1D3YZU1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Shank1D3YZU1 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.91■□□□□ 0.62
Shank1D3YZU1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shank1D3YZU1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms