Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptchd4B9EKX1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptchd4B9EKX1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptchd4B9EKX1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.97■■□□□ 1.27
Ptchd4B9EKX1 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.97■■□□□ 1.27
Ptchd4B9EKX1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ptchd4B9EKX1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptchd4B9EKX1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptchd4B9EKX1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptchd4B9EKX1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptchd4B9EKX1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.96■■□□□ 1.27
Ptchd4B9EKX1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.96■■□□□ 1.27
Ptchd4B9EKX1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptchd4B9EKX1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptchd4B9EKX1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptchd4B9EKX1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptchd4B9EKX1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptchd4B9EKX1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptchd4B9EKX1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Ptchd4B9EKX1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Ptchd4B9EKX1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptchd4B9EKX1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptchd4B9EKX1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ptchd4B9EKX1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptchd4B9EKX1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptchd4B9EKX1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.93■■□□□ 1.26
Ptchd4B9EKX1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.93■■□□□ 1.26
Ptchd4B9EKX1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.93■■□□□ 1.26
Ptchd4B9EKX1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.93■■□□□ 1.26
Ptchd4B9EKX1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.93■■□□□ 1.26
Ptchd4B9EKX1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptchd4B9EKX1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptchd4B9EKX1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptchd4B9EKX1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Ptchd4B9EKX1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptchd4B9EKX1 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.92■■□□□ 1.26
Ptchd4B9EKX1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.92■■□□□ 1.26
Ptchd4B9EKX1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.92■■□□□ 1.26
Ptchd4B9EKX1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptchd4B9EKX1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.9■■□□□ 1.26
Ptchd4B9EKX1 Golgb1-201ENSMUST00000023534 498 ntBASIC22.9■■□□□ 1.26
Ptchd4B9EKX1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ptchd4B9EKX1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Ptchd4B9EKX1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ptchd4B9EKX1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.89■■□□□ 1.25
Ptchd4B9EKX1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ptchd4B9EKX1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.89■■□□□ 1.25
Ptchd4B9EKX1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Ptchd4B9EKX1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Ptchd4B9EKX1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ptchd4B9EKX1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Ptchd4B9EKX1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ptchd4B9EKX1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ptchd4B9EKX1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptchd4B9EKX1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptchd4B9EKX1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.87■■□□□ 1.25
Ptchd4B9EKX1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptchd4B9EKX1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptchd4B9EKX1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
Ptchd4B9EKX1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ptchd4B9EKX1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ptchd4B9EKX1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ptchd4B9EKX1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptchd4B9EKX1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Ptchd4B9EKX1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Ptchd4B9EKX1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptchd4B9EKX1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptchd4B9EKX1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Ptchd4B9EKX1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.85■■□□□ 1.25
Ptchd4B9EKX1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.85■■□□□ 1.25
Ptchd4B9EKX1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptchd4B9EKX1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptchd4B9EKX1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptchd4B9EKX1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptchd4B9EKX1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Ptchd4B9EKX1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptchd4B9EKX1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Ptchd4B9EKX1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.83■■□□□ 1.25
Ptchd4B9EKX1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms