Protein–RNA interactions for Protein: B0QZF7

Proca1, Protein PROCA1, mousemouse

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Proca1B0QZF7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Proca1B0QZF7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Proca1B0QZF7 Zfp131-205ENSMUST00000223812 663 ntBASIC21.19■□□□□ 0.98
Proca1B0QZF7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Proca1B0QZF7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Proca1B0QZF7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Proca1B0QZF7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Proca1B0QZF7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Proca1B0QZF7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Proca1B0QZF7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Proca1B0QZF7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Proca1B0QZF7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Proca1B0QZF7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.17■□□□□ 0.98
Proca1B0QZF7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Proca1B0QZF7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Proca1B0QZF7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.16■□□□□ 0.98
Proca1B0QZF7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Proca1B0QZF7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Proca1B0QZF7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Proca1B0QZF7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Proca1B0QZF7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Proca1B0QZF7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Proca1B0QZF7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Proca1B0QZF7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Proca1B0QZF7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Proca1B0QZF7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Proca1B0QZF7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Proca1B0QZF7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Proca1B0QZF7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Proca1B0QZF7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Proca1B0QZF7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Proca1B0QZF7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Proca1B0QZF7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Proca1B0QZF7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Proca1B0QZF7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.13■□□□□ 0.97
Proca1B0QZF7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Proca1B0QZF7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Proca1B0QZF7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Proca1B0QZF7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.13■□□□□ 0.97
Proca1B0QZF7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Proca1B0QZF7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Proca1B0QZF7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Proca1B0QZF7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Proca1B0QZF7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Proca1B0QZF7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.12■□□□□ 0.97
Proca1B0QZF7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.12■□□□□ 0.97
Proca1B0QZF7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.12■□□□□ 0.97
Proca1B0QZF7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Proca1B0QZF7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Proca1B0QZF7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Proca1B0QZF7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Proca1B0QZF7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Proca1B0QZF7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Proca1B0QZF7 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.11■□□□□ 0.97
Proca1B0QZF7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Proca1B0QZF7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Proca1B0QZF7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Proca1B0QZF7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Proca1B0QZF7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Proca1B0QZF7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Proca1B0QZF7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Proca1B0QZF7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Proca1B0QZF7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Proca1B0QZF7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Proca1B0QZF7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Proca1B0QZF7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Proca1B0QZF7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.1■□□□□ 0.97
Proca1B0QZF7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Proca1B0QZF7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Proca1B0QZF7 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.09■□□□□ 0.97
Proca1B0QZF7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Proca1B0QZF7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Proca1B0QZF7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.09■□□□□ 0.97
Proca1B0QZF7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Proca1B0QZF7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Proca1B0QZF7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Proca1B0QZF7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Proca1B0QZF7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Proca1B0QZF7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Proca1B0QZF7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Proca1B0QZF7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Proca1B0QZF7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Proca1B0QZF7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Proca1B0QZF7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Proca1B0QZF7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Proca1B0QZF7 Gm22567-201ENSMUST00000175542 342 ntBASIC21.06■□□□□ 0.96
Proca1B0QZF7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Proca1B0QZF7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.06■□□□□ 0.96
Proca1B0QZF7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Proca1B0QZF7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Proca1B0QZF7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Proca1B0QZF7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Proca1B0QZF7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Proca1B0QZF7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Proca1B0QZF7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Proca1B0QZF7 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.04■□□□□ 0.96
Proca1B0QZF7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Proca1B0QZF7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Proca1B0QZF7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Proca1B0QZF7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms