Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Chd6A3KFM7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd6A3KFM7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd6A3KFM7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd6A3KFM7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chd6A3KFM7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.74■□□□□ 0.43
Chd6A3KFM7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.74■□□□□ 0.43
Chd6A3KFM7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd6A3KFM7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chd6A3KFM7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Chd6A3KFM7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd6A3KFM7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd6A3KFM7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd6A3KFM7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd6A3KFM7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd6A3KFM7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd6A3KFM7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd6A3KFM7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.72■□□□□ 0.43
Chd6A3KFM7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.72■□□□□ 0.43
Chd6A3KFM7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chd6A3KFM7 Gm12933-201ENSMUST00000120203 872 ntBASIC17.72■□□□□ 0.43
Chd6A3KFM7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Chd6A3KFM7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd6A3KFM7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd6A3KFM7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd6A3KFM7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd6A3KFM7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Chd6A3KFM7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd6A3KFM7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd6A3KFM7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd6A3KFM7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd6A3KFM7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.7■□□□□ 0.42
Chd6A3KFM7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.7■□□□□ 0.42
Chd6A3KFM7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.7■□□□□ 0.42
Chd6A3KFM7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.7■□□□□ 0.42
Chd6A3KFM7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd6A3KFM7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd6A3KFM7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd6A3KFM7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd6A3KFM7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.69■□□□□ 0.42
Chd6A3KFM7 AV356131-201ENSMUST00000206201 750 ntBASIC17.69■□□□□ 0.42
Chd6A3KFM7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Chd6A3KFM7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd6A3KFM7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd6A3KFM7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd6A3KFM7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Chd6A3KFM7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd6A3KFM7 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.68■□□□□ 0.42
Chd6A3KFM7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Chd6A3KFM7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd6A3KFM7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chd6A3KFM7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.68■□□□□ 0.42
Chd6A3KFM7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd6A3KFM7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chd6A3KFM7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd6A3KFM7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.67■□□□□ 0.42
Chd6A3KFM7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd6A3KFM7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.67■□□□□ 0.42
Chd6A3KFM7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Chd6A3KFM7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd6A3KFM7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
Chd6A3KFM7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd6A3KFM7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd6A3KFM7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd6A3KFM7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chd6A3KFM7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd6A3KFM7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.66■□□□□ 0.42
Chd6A3KFM7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd6A3KFM7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd6A3KFM7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd6A3KFM7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd6A3KFM7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd6A3KFM7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd6A3KFM7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd6A3KFM7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd6A3KFM7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.65■□□□□ 0.42
Chd6A3KFM7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Chd6A3KFM7 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.65■□□□□ 0.42
Chd6A3KFM7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.64■□□□□ 0.42
Chd6A3KFM7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd6A3KFM7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd6A3KFM7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd6A3KFM7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd6A3KFM7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd6A3KFM7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd6A3KFM7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd6A3KFM7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd6A3KFM7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd6A3KFM7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.63■□□□□ 0.41
Chd6A3KFM7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd6A3KFM7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd6A3KFM7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.62■□□□□ 0.41
Chd6A3KFM7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd6A3KFM7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chd6A3KFM7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd6A3KFM7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.62■□□□□ 0.41
Chd6A3KFM7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd6A3KFM7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd6A3KFM7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Chd6A3KFM7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms