Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12d-1A0N8R0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Trav12d-1A0N8R0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav12d-1A0N8R0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12d-1A0N8R0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12d-1A0N8R0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav12d-1A0N8R0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12d-1A0N8R0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trav12d-1A0N8R0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12d-1A0N8R0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12d-1A0N8R0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12d-1A0N8R0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12d-1A0N8R0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12d-1A0N8R0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.03■□□□□ 0.32
Trav12d-1A0N8R0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12d-1A0N8R0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12d-1A0N8R0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12d-1A0N8R0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12d-1A0N8R0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12d-1A0N8R0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12d-1A0N8R0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12d-1A0N8R0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav12d-1A0N8R0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav12d-1A0N8R0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12d-1A0N8R0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12d-1A0N8R0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12d-1A0N8R0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12d-1A0N8R0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.01■□□□□ 0.31
Trav12d-1A0N8R0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav12d-1A0N8R0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav12d-1A0N8R0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12d-1A0N8R0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav12d-1A0N8R0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trav12d-1A0N8R0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-1A0N8R0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-1A0N8R0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-1A0N8R0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-1A0N8R0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-1A0N8R0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-1A0N8R0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-1A0N8R0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-1A0N8R0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17■□□□□ 0.31
Trav12d-1A0N8R0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-1A0N8R0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Gm6311-201ENSMUST00000073790 878 ntBASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Notumos-201ENSMUST00000151998 2659 ntBASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-1A0N8R0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-1A0N8R0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-1A0N8R0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-1A0N8R0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-1A0N8R0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-1A0N8R0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-1A0N8R0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.97■□□□□ 0.31
Trav12d-1A0N8R0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-1A0N8R0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-1A0N8R0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12d-1A0N8R0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12d-1A0N8R0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.96■□□□□ 0.31
Trav12d-1A0N8R0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12d-1A0N8R0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav12d-1A0N8R0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav12d-1A0N8R0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Trav12d-1A0N8R0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav12d-1A0N8R0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav12d-1A0N8R0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav12d-1A0N8R0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav12d-1A0N8R0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-1A0N8R0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav12d-1A0N8R0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-1A0N8R0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trav12d-1A0N8R0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-1A0N8R0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-1A0N8R0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-1A0N8R0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-1A0N8R0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-1A0N8R0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12d-1A0N8R0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12d-1A0N8R0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12d-1A0N8R0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms