Protein–RNA interactions for Protein: A0A140T8N5

Igkv6-23, Immunoglobulin kappa variable 6-23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-23A0A140T8N5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv6-23A0A140T8N5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv6-23A0A140T8N5 Gm13241-201ENSMUST00000094493 780 ntBASIC18.86■□□□□ 0.61
Igkv6-23A0A140T8N5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv6-23A0A140T8N5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv6-23A0A140T8N5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv6-23A0A140T8N5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv6-23A0A140T8N5 Gm15039-201ENSMUST00000118914 875 ntBASIC18.85■□□□□ 0.61
Igkv6-23A0A140T8N5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.85■□□□□ 0.61
Igkv6-23A0A140T8N5 Gm9847-201ENSMUST00000052528 599 ntBASIC18.85■□□□□ 0.61
Igkv6-23A0A140T8N5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Igkv6-23A0A140T8N5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv6-23A0A140T8N5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Gm12922-201ENSMUST00000120626 809 ntBASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv6-23A0A140T8N5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.83■□□□□ 0.61
Igkv6-23A0A140T8N5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Igkv6-23A0A140T8N5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.83■□□□□ 0.6
Igkv6-23A0A140T8N5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Igkv6-23A0A140T8N5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.83■□□□□ 0.6
Igkv6-23A0A140T8N5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Igkv6-23A0A140T8N5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Igkv6-23A0A140T8N5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv6-23A0A140T8N5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv6-23A0A140T8N5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv6-23A0A140T8N5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv6-23A0A140T8N5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.81■□□□□ 0.6
Igkv6-23A0A140T8N5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Igkv6-23A0A140T8N5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.81■□□□□ 0.6
Igkv6-23A0A140T8N5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.8■□□□□ 0.6
Igkv6-23A0A140T8N5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv6-23A0A140T8N5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
Igkv6-23A0A140T8N5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv6-23A0A140T8N5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Igkv6-23A0A140T8N5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.8■□□□□ 0.6
Igkv6-23A0A140T8N5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv6-23A0A140T8N5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Igkv6-23A0A140T8N5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv6-23A0A140T8N5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv6-23A0A140T8N5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.79■□□□□ 0.6
Igkv6-23A0A140T8N5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv6-23A0A140T8N5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.79■□□□□ 0.6
Igkv6-23A0A140T8N5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv6-23A0A140T8N5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv6-23A0A140T8N5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv6-23A0A140T8N5 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.79■□□□□ 0.6
Igkv6-23A0A140T8N5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv6-23A0A140T8N5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv6-23A0A140T8N5 Gm21956-201ENSMUST00000179946 522 ntBASIC18.77■□□□□ 0.6
Igkv6-23A0A140T8N5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv6-23A0A140T8N5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Igkv6-23A0A140T8N5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv6-23A0A140T8N5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Igkv6-23A0A140T8N5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.76■□□□□ 0.59
Igkv6-23A0A140T8N5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.76■□□□□ 0.59
Igkv6-23A0A140T8N5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv6-23A0A140T8N5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Igkv6-23A0A140T8N5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Igkv6-23A0A140T8N5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Igkv6-23A0A140T8N5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv6-23A0A140T8N5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Igkv6-23A0A140T8N5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.75■□□□□ 0.59
Igkv6-23A0A140T8N5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv6-23A0A140T8N5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Igkv6-23A0A140T8N5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.75■□□□□ 0.59
Igkv6-23A0A140T8N5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv6-23A0A140T8N5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv6-23A0A140T8N5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv6-23A0A140T8N5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv6-23A0A140T8N5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv6-23A0A140T8N5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.74■□□□□ 0.59
Igkv6-23A0A140T8N5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.74■□□□□ 0.59
Igkv6-23A0A140T8N5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
Igkv6-23A0A140T8N5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Igkv6-23A0A140T8N5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms