Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv3-5A0A140T8M6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Igkv3-5A0A140T8M6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Igkv3-5A0A140T8M6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv3-5A0A140T8M6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Gm7199-201ENSMUST00000118327 1485 ntBASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv3-5A0A140T8M6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv3-5A0A140T8M6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.3□□□□□ -0.28
Igkv3-5A0A140T8M6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv3-5A0A140T8M6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv3-5A0A140T8M6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv3-5A0A140T8M6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv3-5A0A140T8M6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv3-5A0A140T8M6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv3-5A0A140T8M6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv3-5A0A140T8M6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv3-5A0A140T8M6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC13.27□□□□□ -0.28
Igkv3-5A0A140T8M6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv3-5A0A140T8M6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv3-5A0A140T8M6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Igkv3-5A0A140T8M6 Gm44428-201ENSMUST00000204474 874 ntBASIC13.27□□□□□ -0.29
Igkv3-5A0A140T8M6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Igkv3-5A0A140T8M6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igkv3-5A0A140T8M6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Igkv3-5A0A140T8M6 Gm22567-201ENSMUST00000175542 342 ntBASIC13.26□□□□□ -0.29
Igkv3-5A0A140T8M6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv3-5A0A140T8M6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv3-5A0A140T8M6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv3-5A0A140T8M6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv3-5A0A140T8M6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Igkv3-5A0A140T8M6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Gm11687-201ENSMUST00000118911 886 ntBASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Scarna2-201ENSMUST00000157560 414 ntBASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Gm9806-201ENSMUST00000051080 552 ntBASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv3-5A0A140T8M6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms