Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Gm44428-201ENSMUST00000204474 874 ntBASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.5□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.48□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Scarna2-201ENSMUST00000157560 414 ntBASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Gm16437-201ENSMUST00000025669 507 ntBASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.43□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms