Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav11A0A0B4J1J9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav11A0A0B4J1J9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav11A0A0B4J1J9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav11A0A0B4J1J9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav11A0A0B4J1J9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav11A0A0B4J1J9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav11A0A0B4J1J9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav11A0A0B4J1J9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav11A0A0B4J1J9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav11A0A0B4J1J9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav11A0A0B4J1J9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav11A0A0B4J1J9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav11A0A0B4J1J9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav11A0A0B4J1J9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav11A0A0B4J1J9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav11A0A0B4J1J9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav11A0A0B4J1J9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trav11A0A0B4J1J9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav11A0A0B4J1J9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav11A0A0B4J1J9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav11A0A0B4J1J9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trav11A0A0B4J1J9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav11A0A0B4J1J9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav11A0A0B4J1J9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav11A0A0B4J1J9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav11A0A0B4J1J9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav11A0A0B4J1J9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav11A0A0B4J1J9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav11A0A0B4J1J9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav11A0A0B4J1J9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav11A0A0B4J1J9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav11A0A0B4J1J9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav11A0A0B4J1J9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.42□□□□□ -0.1
Trav11A0A0B4J1J9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav11A0A0B4J1J9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav11A0A0B4J1J9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav11A0A0B4J1J9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav11A0A0B4J1J9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav11A0A0B4J1J9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav11A0A0B4J1J9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trav11A0A0B4J1J9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav11A0A0B4J1J9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav11A0A0B4J1J9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav11A0A0B4J1J9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav11A0A0B4J1J9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav11A0A0B4J1J9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav11A0A0B4J1J9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav11A0A0B4J1J9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav11A0A0B4J1J9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms