Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv19A0A0B4J1H4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv19A0A0B4J1H4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv19A0A0B4J1H4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv19A0A0B4J1H4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv19A0A0B4J1H4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.97■□□□□ 0.31
Trbv19A0A0B4J1H4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv19A0A0B4J1H4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv19A0A0B4J1H4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv19A0A0B4J1H4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trbv19A0A0B4J1H4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv19A0A0B4J1H4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trbv19A0A0B4J1H4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.96■□□□□ 0.31
Trbv19A0A0B4J1H4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.96■□□□□ 0.31
Trbv19A0A0B4J1H4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv19A0A0B4J1H4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trbv19A0A0B4J1H4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv19A0A0B4J1H4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trbv19A0A0B4J1H4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv19A0A0B4J1H4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv19A0A0B4J1H4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trbv19A0A0B4J1H4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv19A0A0B4J1H4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv19A0A0B4J1H4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv19A0A0B4J1H4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv19A0A0B4J1H4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trbv19A0A0B4J1H4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv19A0A0B4J1H4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv19A0A0B4J1H4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Trbv19A0A0B4J1H4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv19A0A0B4J1H4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv19A0A0B4J1H4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trbv19A0A0B4J1H4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trbv19A0A0B4J1H4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv19A0A0B4J1H4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv19A0A0B4J1H4 Mir6538-201ENSMUST00000183713 110 ntBASIC16.91■□□□□ 0.3
Trbv19A0A0B4J1H4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Trbv19A0A0B4J1H4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Gm12366-201ENSMUST00000121722 873 ntBASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Gm5786-201ENSMUST00000085368 882 ntBASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv19A0A0B4J1H4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trbv19A0A0B4J1H4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv19A0A0B4J1H4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv19A0A0B4J1H4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv19A0A0B4J1H4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.88■□□□□ 0.29
Trbv19A0A0B4J1H4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.88■□□□□ 0.29
Trbv19A0A0B4J1H4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.88■□□□□ 0.29
Trbv19A0A0B4J1H4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv19A0A0B4J1H4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv19A0A0B4J1H4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv19A0A0B4J1H4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv19A0A0B4J1H4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv19A0A0B4J1H4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms