Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Iqck-206ENSMUST00000208658 2891 ntBASIC16.52■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trbv13-3A0A0B4J1H2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv13-3A0A0B4J1H2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.47■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.46■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trbv13-3A0A0B4J1H2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.44■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Gm9812-201ENSMUST00000061934 968 ntBASIC16.44■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Nkain2-201ENSMUST00000092602 558 ntBASIC16.44■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms