Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-47A0A0A6YY41 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-47A0A0A6YY41 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-47A0A0A6YY41 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-47A0A0A6YY41 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.44■□□□□ 0.38
Ighv1-47A0A0A6YY41 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-47A0A0A6YY41 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-47A0A0A6YY41 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-47A0A0A6YY41 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ighv1-47A0A0A6YY41 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-47A0A0A6YY41 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-47A0A0A6YY41 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-47A0A0A6YY41 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-47A0A0A6YY41 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.41■□□□□ 0.38
Ighv1-47A0A0A6YY41 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-47A0A0A6YY41 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ighv1-47A0A0A6YY41 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ighv1-47A0A0A6YY41 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-47A0A0A6YY41 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-47A0A0A6YY41 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-47A0A0A6YY41 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-47A0A0A6YY41 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ighv1-47A0A0A6YY41 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-47A0A0A6YY41 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Ighv1-47A0A0A6YY41 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-47A0A0A6YY41 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-47A0A0A6YY41 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-47A0A0A6YY41 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.38■□□□□ 0.37
Ighv1-47A0A0A6YY41 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-47A0A0A6YY41 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-47A0A0A6YY41 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-47A0A0A6YY41 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.38■□□□□ 0.37
Ighv1-47A0A0A6YY41 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-47A0A0A6YY41 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Gm10420-201ENSMUST00000121713 882 ntBASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-47A0A0A6YY41 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-47A0A0A6YY41 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-47A0A0A6YY41 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-47A0A0A6YY41 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-47A0A0A6YY41 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ighv1-47A0A0A6YY41 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-47A0A0A6YY41 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-47A0A0A6YY41 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-47A0A0A6YY41 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-47A0A0A6YY41 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Ighv1-47A0A0A6YY41 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.35■□□□□ 0.37
Ighv1-47A0A0A6YY41 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ighv1-47A0A0A6YY41 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-47A0A0A6YY41 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-47A0A0A6YY41 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-47A0A0A6YY41 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-47A0A0A6YY41 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-47A0A0A6YY41 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Ighv1-47A0A0A6YY41 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ighv1-47A0A0A6YY41 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.34■□□□□ 0.37
Ighv1-47A0A0A6YY41 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ighv1-47A0A0A6YY41 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms