Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv21A0A0A6YX06 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv21A0A0A6YX06 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv21A0A0A6YX06 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trbv21A0A0A6YX06 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv21A0A0A6YX06 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv21A0A0A6YX06 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv21A0A0A6YX06 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv21A0A0A6YX06 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trbv21A0A0A6YX06 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv21A0A0A6YX06 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.64■□□□□ 0.73
Trbv21A0A0A6YX06 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv21A0A0A6YX06 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv21A0A0A6YX06 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv21A0A0A6YX06 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv21A0A0A6YX06 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv21A0A0A6YX06 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv21A0A0A6YX06 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.63■□□□□ 0.73
Trbv21A0A0A6YX06 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.63■□□□□ 0.73
Trbv21A0A0A6YX06 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv21A0A0A6YX06 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv21A0A0A6YX06 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv21A0A0A6YX06 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv21A0A0A6YX06 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv21A0A0A6YX06 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.61■□□□□ 0.73
Trbv21A0A0A6YX06 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv21A0A0A6YX06 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.61■□□□□ 0.73
Trbv21A0A0A6YX06 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv21A0A0A6YX06 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv21A0A0A6YX06 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trbv21A0A0A6YX06 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv21A0A0A6YX06 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.6■□□□□ 0.73
Trbv21A0A0A6YX06 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv21A0A0A6YX06 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv21A0A0A6YX06 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv21A0A0A6YX06 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv21A0A0A6YX06 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Trbv21A0A0A6YX06 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Trbv21A0A0A6YX06 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trbv21A0A0A6YX06 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.58■□□□□ 0.73
Trbv21A0A0A6YX06 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.58■□□□□ 0.72
Trbv21A0A0A6YX06 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.58■□□□□ 0.72
Trbv21A0A0A6YX06 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.58■□□□□ 0.72
Trbv21A0A0A6YX06 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Trbv21A0A0A6YX06 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv21A0A0A6YX06 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv21A0A0A6YX06 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv21A0A0A6YX06 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.57■□□□□ 0.72
Trbv21A0A0A6YX06 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv21A0A0A6YX06 Gm45444-201ENSMUST00000211394 898 ntBASIC19.57■□□□□ 0.72
Trbv21A0A0A6YX06 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.57■□□□□ 0.72
Trbv21A0A0A6YX06 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv21A0A0A6YX06 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv21A0A0A6YX06 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv21A0A0A6YX06 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms