Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28897A0A087WP44 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Gm28897A0A087WP44 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.64■□□□□ 0.57
Gm28897A0A087WP44 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28897A0A087WP44 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28897A0A087WP44 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.64■□□□□ 0.57
Gm28897A0A087WP44 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.64■□□□□ 0.57
Gm28897A0A087WP44 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.64■□□□□ 0.57
Gm28897A0A087WP44 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Gm28897A0A087WP44 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28897A0A087WP44 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.63■□□□□ 0.57
Gm28897A0A087WP44 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Gm28897A0A087WP44 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28897A0A087WP44 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28897A0A087WP44 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28897A0A087WP44 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28897A0A087WP44 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28897A0A087WP44 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28897A0A087WP44 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28897A0A087WP44 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28897A0A087WP44 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28897A0A087WP44 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Gm8503-201ENSMUST00000118131 455 ntBASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Gm9812-201ENSMUST00000061934 968 ntBASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28897A0A087WP44 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm28897A0A087WP44 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm28897A0A087WP44 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Gm28897A0A087WP44 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28897A0A087WP44 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28897A0A087WP44 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Gm28897A0A087WP44 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
Gm28897A0A087WP44 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Gm28897A0A087WP44 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28897A0A087WP44 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.57■□□□□ 0.56
Gm28897A0A087WP44 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28897A0A087WP44 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28897A0A087WP44 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28897A0A087WP44 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28897A0A087WP44 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28897A0A087WP44 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms