Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav21-dv12A0A075B6C4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav21-dv12A0A075B6C4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav21-dv12A0A075B6C4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav21-dv12A0A075B6C4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav21-dv12A0A075B6C4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav21-dv12A0A075B6C4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav21-dv12A0A075B6C4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav21-dv12A0A075B6C4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav21-dv12A0A075B6C4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav21-dv12A0A075B6C4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav21-dv12A0A075B6C4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav21-dv12A0A075B6C4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav21-dv12A0A075B6C4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav21-dv12A0A075B6C4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav21-dv12A0A075B6C4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav21-dv12A0A075B6C4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav21-dv12A0A075B6C4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav21-dv12A0A075B6C4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav21-dv12A0A075B6C4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav21-dv12A0A075B6C4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav21-dv12A0A075B6C4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav21-dv12A0A075B6C4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav21-dv12A0A075B6C4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav21-dv12A0A075B6C4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav21-dv12A0A075B6C4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav21-dv12A0A075B6C4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.2■□□□□ 0.18
Trav21-dv12A0A075B6C4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav21-dv12A0A075B6C4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav21-dv12A0A075B6C4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav21-dv12A0A075B6C4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav21-dv12A0A075B6C4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav21-dv12A0A075B6C4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav21-dv12A0A075B6C4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav21-dv12A0A075B6C4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Mir6538-201ENSMUST00000183713 110 ntBASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav21-dv12A0A075B6C4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav21-dv12A0A075B6C4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav21-dv12A0A075B6C4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Trav21-dv12A0A075B6C4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav21-dv12A0A075B6C4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.15■□□□□ 0.18
Trav21-dv12A0A075B6C4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Gm12366-201ENSMUST00000121722 873 ntBASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Gm5786-201ENSMUST00000085368 882 ntBASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav21-dv12A0A075B6C4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav21-dv12A0A075B6C4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms