Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Mir3960-201ENSMUST00000198213 73 ntBASIC16.28■□□□□ 0.2
Trav16A0A075B653 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav16A0A075B653 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav16A0A075B653 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav16A0A075B653 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav16A0A075B653 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav16A0A075B653 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav16A0A075B653 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav16A0A075B653 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trav16A0A075B653 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.27■□□□□ 0.19
Trav16A0A075B653 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav16A0A075B653 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav16A0A075B653 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav16A0A075B653 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav16A0A075B653 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav16A0A075B653 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav16A0A075B653 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.26■□□□□ 0.19
Trav16A0A075B653 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav16A0A075B653 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav16A0A075B653 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav16A0A075B653 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.25■□□□□ 0.19
Trav16A0A075B653 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav16A0A075B653 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.24■□□□□ 0.19
Trav16A0A075B653 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav16A0A075B653 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav16A0A075B653 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trav16A0A075B653 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav16A0A075B653 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav16A0A075B653 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav16A0A075B653 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav16A0A075B653 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav16A0A075B653 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.23■□□□□ 0.19
Trav16A0A075B653 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav16A0A075B653 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.23■□□□□ 0.19
Trav16A0A075B653 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav16A0A075B653 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav16A0A075B653 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav16A0A075B653 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav16A0A075B653 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav16A0A075B653 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav16A0A075B653 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav16A0A075B653 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav16A0A075B653 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav16A0A075B653 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav16A0A075B653 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav16A0A075B653 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav16A0A075B653 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.22■□□□□ 0.19
Trav16A0A075B653 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav16A0A075B653 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav16A0A075B653 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav16A0A075B653 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav16A0A075B653 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav16A0A075B653 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav16A0A075B653 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav16A0A075B653 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav16A0A075B653 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav16A0A075B653 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav16A0A075B653 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav16A0A075B653 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav16A0A075B653 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav16A0A075B653 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav16A0A075B653 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav16A0A075B653 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Trav16A0A075B653 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Gm45364-201ENSMUST00000210883 159 ntBASIC16.19■□□□□ 0.18
Trav16A0A075B653 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav16A0A075B653 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms