Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4-2A0A075B638 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4-2A0A075B638 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4-2A0A075B638 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-2A0A075B638 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav4-2A0A075B638 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4-2A0A075B638 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4-2A0A075B638 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trav4-2A0A075B638 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav4-2A0A075B638 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trav4-2A0A075B638 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4-2A0A075B638 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Mir3960-201ENSMUST00000198213 73 ntBASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-2A0A075B638 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-2A0A075B638 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.73■□□□□ 0.27
Trav4-2A0A075B638 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-2A0A075B638 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav4-2A0A075B638 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav4-2A0A075B638 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav4-2A0A075B638 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav4-2A0A075B638 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav4-2A0A075B638 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-2A0A075B638 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.7■□□□□ 0.26
Trav4-2A0A075B638 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav4-2A0A075B638 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trav4-2A0A075B638 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-2A0A075B638 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-2A0A075B638 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-2A0A075B638 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-2A0A075B638 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms