Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4n-4A0A075B615 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4n-4A0A075B615 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4n-4A0A075B615 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4n-4A0A075B615 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4n-4A0A075B615 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav4n-4A0A075B615 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4n-4A0A075B615 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav4n-4A0A075B615 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav4n-4A0A075B615 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4n-4A0A075B615 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4n-4A0A075B615 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.68□□□□□ -0.06
Trav4n-4A0A075B615 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4n-4A0A075B615 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4n-4A0A075B615 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4n-4A0A075B615 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4n-4A0A075B615 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav4n-4A0A075B615 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4n-4A0A075B615 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4n-4A0A075B615 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav4n-4A0A075B615 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav4n-4A0A075B615 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4n-4A0A075B615 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4n-4A0A075B615 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.66□□□□□ -0.06
Trav4n-4A0A075B615 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4n-4A0A075B615 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4n-4A0A075B615 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4n-4A0A075B615 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4n-4A0A075B615 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4n-4A0A075B615 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav4n-4A0A075B615 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav4n-4A0A075B615 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4n-4A0A075B615 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4n-4A0A075B615 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4n-4A0A075B615 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.07
Trav4n-4A0A075B615 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4n-4A0A075B615 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.64□□□□□ -0.07
Trav4n-4A0A075B615 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4n-4A0A075B615 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4n-4A0A075B615 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4n-4A0A075B615 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4n-4A0A075B615 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav4n-4A0A075B615 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav4n-4A0A075B615 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4n-4A0A075B615 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4n-4A0A075B615 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4n-4A0A075B615 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav4n-4A0A075B615 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4n-4A0A075B615 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav4n-4A0A075B615 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav4n-4A0A075B615 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4n-4A0A075B615 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4n-4A0A075B615 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4n-4A0A075B615 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4n-4A0A075B615 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4n-4A0A075B615 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav4n-4A0A075B615 Gm37136-201ENSMUST00000194368 194 ntBASIC14.62□□□□□ -0.07
Trav4n-4A0A075B615 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.62□□□□□ -0.07
Trav4n-4A0A075B615 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4n-4A0A075B615 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav4n-4A0A075B615 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav4n-4A0A075B615 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4n-4A0A075B615 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4n-4A0A075B615 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav4n-4A0A075B615 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.61□□□□□ -0.07
Trav4n-4A0A075B615 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4n-4A0A075B615 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4n-4A0A075B615 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4n-4A0A075B615 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4n-4A0A075B615 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms