Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-1A0A075B606 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-1A0A075B606 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-1A0A075B606 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav13d-1A0A075B606 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-1A0A075B606 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Trav13d-1A0A075B606 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-1A0A075B606 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-1A0A075B606 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-1A0A075B606 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-1A0A075B606 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-1A0A075B606 Gm14117-201ENSMUST00000122417 843 ntBASIC15.43■□□□□ 0.06
Trav13d-1A0A075B606 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav13d-1A0A075B606 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-1A0A075B606 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-1A0A075B606 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-1A0A075B606 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Gm9959-201ENSMUST00000068277 390 ntBASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-1A0A075B606 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-1A0A075B606 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-1A0A075B606 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Trav13d-1A0A075B606 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav13d-1A0A075B606 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-1A0A075B606 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-1A0A075B606 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-1A0A075B606 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav13d-1A0A075B606 Gm45102-201ENSMUST00000207427 857 ntBASIC15.4■□□□□ 0.06
Trav13d-1A0A075B606 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-1A0A075B606 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-1A0A075B606 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-1A0A075B606 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav13d-1A0A075B606 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-1A0A075B606 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav13d-1A0A075B606 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav13d-1A0A075B606 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav13d-1A0A075B606 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-1A0A075B606 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 Etf1-202ENSMUST00000180351 108 ntBASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-1A0A075B606 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav13d-1A0A075B606 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav13d-1A0A075B606 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-1A0A075B606 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Trav13d-1A0A075B606 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav13d-1A0A075B606 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms