Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-54A0A075B5W5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-54A0A075B5W5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-54A0A075B5W5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-54A0A075B5W5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ighv1-54A0A075B5W5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.96■□□□□ 0.63
Ighv1-54A0A075B5W5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-54A0A075B5W5 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.96■□□□□ 0.63
Ighv1-54A0A075B5W5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.96■□□□□ 0.63
Ighv1-54A0A075B5W5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.96■□□□□ 0.63
Ighv1-54A0A075B5W5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-54A0A075B5W5 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.95■□□□□ 0.62
Ighv1-54A0A075B5W5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ighv1-54A0A075B5W5 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.95■□□□□ 0.62
Ighv1-54A0A075B5W5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-54A0A075B5W5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Ighv1-54A0A075B5W5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-54A0A075B5W5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ighv1-54A0A075B5W5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-54A0A075B5W5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-54A0A075B5W5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-54A0A075B5W5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-54A0A075B5W5 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.93■□□□□ 0.62
Ighv1-54A0A075B5W5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-54A0A075B5W5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ighv1-54A0A075B5W5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.93■□□□□ 0.62
Ighv1-54A0A075B5W5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-54A0A075B5W5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-54A0A075B5W5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Ighv1-54A0A075B5W5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-54A0A075B5W5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ighv1-54A0A075B5W5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-54A0A075B5W5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-54A0A075B5W5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-54A0A075B5W5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-54A0A075B5W5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-54A0A075B5W5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Ighv1-54A0A075B5W5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-54A0A075B5W5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-54A0A075B5W5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ighv1-54A0A075B5W5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.9■□□□□ 0.62
Ighv1-54A0A075B5W5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ighv1-54A0A075B5W5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ighv1-54A0A075B5W5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-54A0A075B5W5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ighv1-54A0A075B5W5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-54A0A075B5W5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-54A0A075B5W5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ighv1-54A0A075B5W5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ighv1-54A0A075B5W5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.88■□□□□ 0.61
Ighv1-54A0A075B5W5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-54A0A075B5W5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ighv1-54A0A075B5W5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-54A0A075B5W5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ighv1-54A0A075B5W5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-54A0A075B5W5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-54A0A075B5W5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-54A0A075B5W5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-54A0A075B5W5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ighv1-54A0A075B5W5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-54A0A075B5W5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-54A0A075B5W5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-54A0A075B5W5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Gm10232-201ENSMUST00000089221 720 ntBASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-54A0A075B5W5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms