Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mrpl55Q9CZ83 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mrpl55Q9CZ83 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mrpl55Q9CZ83 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl55Q9CZ83 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.54■□□□□ 0.4
Mrpl55Q9CZ83 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl55Q9CZ83 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl55Q9CZ83 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Mrpl55Q9CZ83 Rab21-202ENSMUST00000218831 843 ntBASIC17.51■□□□□ 0.39
Mrpl55Q9CZ83 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl55Q9CZ83 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Mrpl55Q9CZ83 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Mrpl55Q9CZ83 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl55Q9CZ83 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl55Q9CZ83 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.48■□□□□ 0.39
Mrpl55Q9CZ83 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl55Q9CZ83 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl55Q9CZ83 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl55Q9CZ83 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl55Q9CZ83 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl55Q9CZ83 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Mrpl55Q9CZ83 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Mrpl55Q9CZ83 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl55Q9CZ83 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl55Q9CZ83 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl55Q9CZ83 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Mrpl55Q9CZ83 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl55Q9CZ83 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl55Q9CZ83 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mrpl55Q9CZ83 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl55Q9CZ83 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrpl55Q9CZ83 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.3■□□□□ 0.36
Mrpl55Q9CZ83 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.29■□□□□ 0.36
Mrpl55Q9CZ83 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl55Q9CZ83 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.29■□□□□ 0.36
Mrpl55Q9CZ83 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl55Q9CZ83 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl55Q9CZ83 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Mrpl55Q9CZ83 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl55Q9CZ83 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl55Q9CZ83 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl55Q9CZ83 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.27■□□□□ 0.35
Mrpl55Q9CZ83 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Mrpl55Q9CZ83 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Mrpl55Q9CZ83 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl55Q9CZ83 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.26■□□□□ 0.35
Mrpl55Q9CZ83 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl55Q9CZ83 Zxda-201ENSMUST00000117281 2621 ntBASIC17.25■□□□□ 0.35
Mrpl55Q9CZ83 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl55Q9CZ83 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl55Q9CZ83 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl55Q9CZ83 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl55Q9CZ83 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl55Q9CZ83 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Mrpl55Q9CZ83 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl55Q9CZ83 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Mrpl55Q9CZ83 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl55Q9CZ83 Gm26115-201ENSMUST00000175605 87 ntBASIC17.16■□□□□ 0.34
Mrpl55Q9CZ83 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.14■□□□□ 0.33
Mrpl55Q9CZ83 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl55Q9CZ83 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl55Q9CZ83 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl55Q9CZ83 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Mrpl55Q9CZ83 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl55Q9CZ83 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl55Q9CZ83 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl55Q9CZ83 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl55Q9CZ83 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl55Q9CZ83 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl55Q9CZ83 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.09■□□□□ 0.33
Mrpl55Q9CZ83 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mrpl55Q9CZ83 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.08■□□□□ 0.32
Mrpl55Q9CZ83 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl55Q9CZ83 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl55Q9CZ83 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl55Q9CZ83 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Mrpl55Q9CZ83 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl55Q9CZ83 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl55Q9CZ83 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.05■□□□□ 0.32
Mrpl55Q9CZ83 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.05■□□□□ 0.32
Mrpl55Q9CZ83 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl55Q9CZ83 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl55Q9CZ83 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl55Q9CZ83 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl55Q9CZ83 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mrpl55Q9CZ83 Gm8109-201ENSMUST00000194076 746 ntBASIC17.01■□□□□ 0.31
Mrpl55Q9CZ83 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17■□□□□ 0.31
Mrpl55Q9CZ83 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mrpl55Q9CZ83 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mrpl55Q9CZ83 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mrpl55Q9CZ83 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mrpl55Q9CZ83 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mrpl55Q9CZ83 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.97■□□□□ 0.31
Mrpl55Q9CZ83 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Mrpl55Q9CZ83 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Mrpl55Q9CZ83 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mrpl55Q9CZ83 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Mrpl55Q9CZ83 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mrpl55Q9CZ83 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mrpl55Q9CZ83 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms