Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hist1h1aP43275 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hist1h1aP43275 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.29■■□□□ 1.16
Hist1h1aP43275 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Hist1h1aP43275 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.28■■□□□ 1.16
Hist1h1aP43275 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hist1h1aP43275 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hist1h1aP43275 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h1aP43275 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h1aP43275 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.23■■□□□ 1.15
Hist1h1aP43275 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hist1h1aP43275 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hist1h1aP43275 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.17■■□□□ 1.14
Hist1h1aP43275 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Hist1h1aP43275 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hist1h1aP43275 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hist1h1aP43275 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.09■■□□□ 1.13
Hist1h1aP43275 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Hist1h1aP43275 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.08■■□□□ 1.13
Hist1h1aP43275 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hist1h1aP43275 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hist1h1aP43275 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hist1h1aP43275 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hist1h1aP43275 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hist1h1aP43275 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hist1h1aP43275 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.98■■□□□ 1.11
Hist1h1aP43275 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
Hist1h1aP43275 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hist1h1aP43275 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.9■■□□□ 1.1
Hist1h1aP43275 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Hist1h1aP43275 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hist1h1aP43275 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.86■■□□□ 1.09
Hist1h1aP43275 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Hist1h1aP43275 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.85■■□□□ 1.09
Hist1h1aP43275 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hist1h1aP43275 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hist1h1aP43275 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hist1h1aP43275 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.78■■□□□ 1.08
Hist1h1aP43275 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hist1h1aP43275 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hist1h1aP43275 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hist1h1aP43275 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hist1h1aP43275 Rab21-202ENSMUST00000218831 843 ntBASIC21.73■■□□□ 1.07
Hist1h1aP43275 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hist1h1aP43275 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hist1h1aP43275 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.67■■□□□ 1.06
Hist1h1aP43275 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hist1h1aP43275 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Hist1h1aP43275 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.63■■□□□ 1.05
Hist1h1aP43275 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hist1h1aP43275 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hist1h1aP43275 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hist1h1aP43275 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Hist1h1aP43275 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hist1h1aP43275 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.58■■□□□ 1.05
Hist1h1aP43275 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hist1h1aP43275 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.57■■□□□ 1.04
Hist1h1aP43275 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hist1h1aP43275 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.56■■□□□ 1.04
Hist1h1aP43275 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hist1h1aP43275 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hist1h1aP43275 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hist1h1aP43275 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Hist1h1aP43275 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.49■■□□□ 1.03
Hist1h1aP43275 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hist1h1aP43275 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Hist1h1aP43275 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.48■■□□□ 1.03
Hist1h1aP43275 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Hist1h1aP43275 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hist1h1aP43275 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hist1h1aP43275 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hist1h1aP43275 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hist1h1aP43275 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Hist1h1aP43275 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hist1h1aP43275 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hist1h1aP43275 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hist1h1aP43275 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hist1h1aP43275 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hist1h1aP43275 Zxda-201ENSMUST00000117281 2621 ntBASIC21.38■■□□□ 1.01
Hist1h1aP43275 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hist1h1aP43275 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hist1h1aP43275 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hist1h1aP43275 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hist1h1aP43275 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hist1h1aP43275 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hist1h1aP43275 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.36■■□□□ 1.01
Hist1h1aP43275 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hist1h1aP43275 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hist1h1aP43275 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Hist1h1aP43275 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hist1h1aP43275 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h1aP43275 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h1aP43275 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist1h1aP43275 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.26■□□□□ 0.99
Hist1h1aP43275 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hist1h1aP43275 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h1aP43275 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h1aP43275 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h1aP43275 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hist1h1aP43275 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms