Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Igkv3-3A0A140T8Q0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv3-3A0A140T8Q0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv3-3A0A140T8Q0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Igkv3-3A0A140T8Q0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv3-3A0A140T8Q0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv3-3A0A140T8Q0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv3-3A0A140T8Q0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Igkv3-3A0A140T8Q0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv3-3A0A140T8Q0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv3-3A0A140T8Q0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.35■□□□□ 0.21
Igkv3-3A0A140T8Q0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv3-3A0A140T8Q0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv3-3A0A140T8Q0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv3-3A0A140T8Q0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Igkv3-3A0A140T8Q0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv3-3A0A140T8Q0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv3-3A0A140T8Q0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv3-3A0A140T8Q0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv3-3A0A140T8Q0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv3-3A0A140T8Q0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC16.29■□□□□ 0.2
Igkv3-3A0A140T8Q0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.28■□□□□ 0.2
Igkv3-3A0A140T8Q0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv3-3A0A140T8Q0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv3-3A0A140T8Q0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.25■□□□□ 0.19
Igkv3-3A0A140T8Q0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Igkv3-3A0A140T8Q0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv3-3A0A140T8Q0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Igkv3-3A0A140T8Q0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv3-3A0A140T8Q0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv3-3A0A140T8Q0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC16.23■□□□□ 0.19
Igkv3-3A0A140T8Q0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv3-3A0A140T8Q0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv3-3A0A140T8Q0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv3-3A0A140T8Q0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv3-3A0A140T8Q0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Igkv3-3A0A140T8Q0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv3-3A0A140T8Q0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Igkv3-3A0A140T8Q0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv3-3A0A140T8Q0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv3-3A0A140T8Q0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv3-3A0A140T8Q0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv3-3A0A140T8Q0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv3-3A0A140T8Q0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv3-3A0A140T8Q0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Igkv3-3A0A140T8Q0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv3-3A0A140T8Q0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Igkv3-3A0A140T8Q0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-3A0A140T8Q0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv3-3A0A140T8Q0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv3-3A0A140T8Q0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv3-3A0A140T8Q0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv3-3A0A140T8Q0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Igkv3-3A0A140T8Q0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Igkv3-3A0A140T8Q0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv3-3A0A140T8Q0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv3-3A0A140T8Q0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Igkv3-3A0A140T8Q0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv3-3A0A140T8Q0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Igkv3-3A0A140T8Q0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv3-3A0A140T8Q0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC15.97■□□□□ 0.15
Igkv3-3A0A140T8Q0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Igkv3-3A0A140T8Q0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv3-3A0A140T8Q0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv3-3A0A140T8Q0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Igkv3-3A0A140T8Q0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv3-3A0A140T8Q0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv3-3A0A140T8Q0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv3-3A0A140T8Q0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv3-3A0A140T8Q0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv3-3A0A140T8Q0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv3-3A0A140T8Q0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv3-3A0A140T8Q0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.84■□□□□ 0.13
Igkv3-3A0A140T8Q0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Igkv3-3A0A140T8Q0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv3-3A0A140T8Q0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv3-3A0A140T8Q0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv3-3A0A140T8Q0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Igkv3-3A0A140T8Q0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv3-3A0A140T8Q0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv3-3A0A140T8Q0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv3-3A0A140T8Q0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Igkv3-3A0A140T8Q0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv3-3A0A140T8Q0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv3-3A0A140T8Q0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv3-3A0A140T8Q0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv3-3A0A140T8Q0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igkv3-3A0A140T8Q0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Igkv3-3A0A140T8Q0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv3-3A0A140T8Q0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv3-3A0A140T8Q0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Igkv3-3A0A140T8Q0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC15.72■□□□□ 0.11
Igkv3-3A0A140T8Q0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv3-3A0A140T8Q0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Igkv3-3A0A140T8Q0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Igkv3-3A0A140T8Q0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv3-3A0A140T8Q0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Igkv3-3A0A140T8Q0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv3-3A0A140T8Q0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv3-3A0A140T8Q0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms