Protein–RNA interactions for Protein: A0A087WSL9

Gm28539, Predicted gene 28539, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28539A0A087WSL9 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.51■□□□□ 0.39
Gm28539A0A087WSL9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28539A0A087WSL9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28539A0A087WSL9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28539A0A087WSL9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28539A0A087WSL9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.46■□□□□ 0.39
Gm28539A0A087WSL9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.44■□□□□ 0.38
Gm28539A0A087WSL9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28539A0A087WSL9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28539A0A087WSL9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm28539A0A087WSL9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28539A0A087WSL9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28539A0A087WSL9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28539A0A087WSL9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28539A0A087WSL9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28539A0A087WSL9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28539A0A087WSL9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28539A0A087WSL9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Gm28539A0A087WSL9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28539A0A087WSL9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Gm28539A0A087WSL9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Gm28539A0A087WSL9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm28539A0A087WSL9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
Gm28539A0A087WSL9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm28539A0A087WSL9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Gm28539A0A087WSL9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28539A0A087WSL9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28539A0A087WSL9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28539A0A087WSL9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28539A0A087WSL9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28539A0A087WSL9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28539A0A087WSL9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28539A0A087WSL9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28539A0A087WSL9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm28539A0A087WSL9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28539A0A087WSL9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.2■□□□□ 0.34
Gm28539A0A087WSL9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28539A0A087WSL9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28539A0A087WSL9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28539A0A087WSL9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28539A0A087WSL9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28539A0A087WSL9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28539A0A087WSL9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm28539A0A087WSL9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm28539A0A087WSL9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28539A0A087WSL9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28539A0A087WSL9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm28539A0A087WSL9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28539A0A087WSL9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28539A0A087WSL9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28539A0A087WSL9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28539A0A087WSL9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28539A0A087WSL9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28539A0A087WSL9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Gm28539A0A087WSL9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28539A0A087WSL9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28539A0A087WSL9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28539A0A087WSL9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28539A0A087WSL9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm28539A0A087WSL9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Gm28539A0A087WSL9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28539A0A087WSL9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28539A0A087WSL9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28539A0A087WSL9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28539A0A087WSL9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28539A0A087WSL9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Gm28539A0A087WSL9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28539A0A087WSL9 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.95■□□□□ 0.3
Gm28539A0A087WSL9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28539A0A087WSL9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Gm28539A0A087WSL9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gm28539A0A087WSL9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28539A0A087WSL9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28539A0A087WSL9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28539A0A087WSL9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28539A0A087WSL9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28539A0A087WSL9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Gm28539A0A087WSL9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28539A0A087WSL9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28539A0A087WSL9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28539A0A087WSL9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28539A0A087WSL9 Gm10524-201ENSMUST00000181931 1893 ntBASIC16.81■□□□□ 0.28
Gm28539A0A087WSL9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gm28539A0A087WSL9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28539A0A087WSL9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28539A0A087WSL9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28539A0A087WSL9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28539A0A087WSL9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28539A0A087WSL9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28539A0A087WSL9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28539A0A087WSL9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28539A0A087WSL9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.76■□□□□ 0.27
Gm28539A0A087WSL9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28539A0A087WSL9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28539A0A087WSL9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28539A0A087WSL9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28539A0A087WSL9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28539A0A087WSL9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28539A0A087WSL9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28539A0A087WSL9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms