Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Gm12314-201ENSMUST00000118104 538 ntBASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Gm38241-201ENSMUST00000192641 898 ntBASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Gm5950-201ENSMUST00000213337 772 ntBASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn8aQ9WTU3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Acot6-202ENSMUST00000222921 3622 ntBASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn8aQ9WTU3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Gm14109-201ENSMUST00000118814 309 ntBASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Gm23119-201ENSMUST00000158610 140 ntBASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.91□□□□□ -0.34
Scn8aQ9WTU3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms