Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Gm15429-201ENSMUST00000151268 798 ntBASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Mir7221-201ENSMUST00000184009 72 ntBASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sec61a2Q9JLR1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a2Q9JLR1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms