Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Gm1335-201ENSMUST00000121653 386 ntBASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Gm17208-201ENSMUST00000168388 535 ntBASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Gm43818-201ENSMUST00000200605 466 ntBASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Gm40466-201ENSMUST00000212174 422 ntBASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ldb3Q9JKS4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm13226-201ENSMUST00000117838 404 ntBASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm15824-201ENSMUST00000119516 955 ntBASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm32025-201ENSMUST00000217960 307 ntBASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm19163-201ENSMUST00000223313 780 ntBASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Ldb3Q9JKS4 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb3Q9JKS4 Gm14660-201ENSMUST00000119809 575 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms