Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Mir1943-201ENSMUST00000158276 73 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 AY036118-201ENSMUST00000200021 923 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm5051-201ENSMUST00000204085 485 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm24231-201ENSMUST00000104315 133 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cacna1fQ9JIS7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Gm12208-201ENSMUST00000122004 163 ntBASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Mir6546-201ENSMUST00000184460 62 ntBASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacna1fQ9JIS7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Matn2-206ENSMUST00000228570 2798 ntBASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Gm15515-201ENSMUST00000117827 822 ntBASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Gm8199-201ENSMUST00000121323 823 ntBASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Gm18038-201ENSMUST00000197900 485 ntBASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1fQ9JIS7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms